| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4956 |
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| Symbol | appB |
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| ID | 4041818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1622655 |
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| End bp | 1623662 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980377 |
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| Product | cytochrome d ubiquinol oxidase subunit II |
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| Protein accession | YP_587087 |
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| Protein GI | 94313878 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.545349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATCG ATCTCTCTCT GCTCTGGATT CTGATCATCT TCTTCGGCGT GATGATGTAC
GTCGTGATGG ACGGCTTCGA TCTCGGCATC GGCATCCTGT TTCCGTTCGT GCCCGCCCGG
CATGACCGCG ATGTGATGAT GAACACGGTG GCGCCCGTCT GGGACGGCAA CGAGACCTGG
CTGGTGCTGG GCGGCGCGGG CCTGCTGGCG GCGTTCCCGC TGGCCTACTC CGTGGTCCTG
TCCGCGCTCT ACCTGCCGAT CGTTCTGATG CTGCTGGGGC TGATCTTTCG TGGCGTGGCG
TTCGAATTCC GCTTCAAGGC CAACGACCGC GAACGCCCGG TATGGGATCT GTCGTTCATG
GGCGGATCAC TGGTGGCCGC GTTCTTCCAG GGGGTGGCGC TGGGGGCCTA CGTCGATGGC
CTGCCCGTCA AGGACGGCGC CTTCGTGGGC AGCCCCATGG GATGGCTCGC CCCGTTCCCG
CTGTTCTGCG GCGTCGGCGT GGTCGTCGCC TACACGCTGC TGGGGGGCAC GTGGCTGATC
CTGAAGACCG AGGGCCCGCT GCACGACCGG ATGAAAGCCC TGACGTCCCG GCTGGTGTGG
GCGCTGCTCG CGATCATCGC GGTCATCAGC ATCTGGACGC CGATTGCCCA GCCACGCATC
GCCGAACGCT GGTTCAGCCT GCCCAACCTC TTCTGGTTCG CGCCGGTCCC CCTGCTTGTG
CTGCTGTGCG CCGTGCTCCT GCTGCGTGCC TTGCGCCGGG ACACCCATGC GCAACCGTTC
CTCTTCACGC TCGGGCTGGT TTTCCTGGGA TACAGCGGCC TGGCCATCAG TGTGTGGCCC
AACATCGTGC CGCCATCGGT CTCGATCTGG GCCGCCGCCG CGCCGCCGCA AAGCCAGGGC
TTCGCGCTGG TCGGCGCGCT GTTCGTGATT CCGTTCATCC TGATGTACAC GGTGTGGTCC
TACTACGTGT TCCGCGGCAA GGTCCGCGTC GGCGATGGCT ACCACTAG
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| Protein sequence | MGIDLSLLWI LIIFFGVMMY VVMDGFDLGI GILFPFVPAR HDRDVMMNTV APVWDGNETW
LVLGGAGLLA AFPLAYSVVL SALYLPIVLM LLGLIFRGVA FEFRFKANDR ERPVWDLSFM
GGSLVAAFFQ GVALGAYVDG LPVKDGAFVG SPMGWLAPFP LFCGVGVVVA YTLLGGTWLI
LKTEGPLHDR MKALTSRLVW ALLAIIAVIS IWTPIAQPRI AERWFSLPNL FWFAPVPLLV
LLCAVLLLRA LRRDTHAQPF LFTLGLVFLG YSGLAISVWP NIVPPSVSIW AAAAPPQSQG
FALVGALFVI PFILMYTVWS YYVFRGKVRV GDGYH
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