| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4954 |
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| Symbol | |
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| ID | 4041816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1619637 |
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| End bp | 1621037 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980375 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_587085 |
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| Protein GI | 94313876 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA TGAAAGGCGA ACGCCATGTG GAATGGCTGC GCCCGCTGAC ACCGGGCGCA
GGGCCGCGCT ACATGCAGAT CGCGGATTTG ATTGCGCGGG CGGTGCAGAC GGGCGAACTC
GCCGTCGGCG ACCAGATCCC GTCGCAGCGG TGGCTGGCGA CGCAGCTCGG GGTGGATCTC
ACCACGGTGA CGCGTGCCTA TACGGAGGCA CGCAATCGTG GCCTGATCTC GTCGTTCAGC
GGGCGTGGCT CGTTCGTCGC GGGCGTTGGC GAGGCGGGCG ATGAGATGCG TATCGACCTG
TCGATGAACA CCCCACCGCA GCCGGCCAGT GGAAGCATGG GTGACGCGCT CAAGTTGGCC
ATTGACGAAG TGCTGGCACG GCAAGGCATC GAGGCGATGT CCGCCTACCA GGACACGTGG
TCCGGCGCCT CGATCGTCCA GGCGGGCAGG GCGTGGCTGC GGCCCGCGGT TGGCGCGATG
GCAGGGCAGC AGGAACTGAT TGTCTGCGCG GGTACCCAGG CCGCGATCTT CAGCCTTTTG
CAGTCGCGCA CGCAGCGTGG GGATGCCGTC CTTGCCGAGC CGCTGACCTA TCCCGGCTTT
CTGCTTACCG CGCAGCAGCT CGGTTTGCGT GTCGTCGCGC TCGAAGTCGA CCAGGATGGG
GTGTTGCCGG ACGCGATCGA ACGAAGCCAT CGCGAAACCG GCGCGCAGGT GATCTACCTG
AATCCGACGC TCCAGAACCC GACTGCGAGC ACCATGCCCG AGCACCGGCG CGAGGCCATC
GGGGCCATGT TGCGCAAGCT CGGCATGACG CTGATCGAGG ACGATCCCTA TCGCTACCTG
CTCAACGACG CGCCGCCGCC GATCGTCACC TACGAAGGGG GCGAGCGTGC GTACTATCTG
ACCTCGCTGT CGAAATGCCT CTGGCCGAGC CTGCGCACGT CGTTCGTCCT GTTGCCGCGC
CAGCACGATG CCGCAATGCT GCAGGATGCG TTGCGCGCCT CCAGCATGGG GTGTTCGCTA
TTGCTGACCG CGGTGGCCGA GCACTGGATG CGCAGTGGCC AGGCCAGGCA CCTGATGCTC
GACATCCAGC GCGAAGTGCG CGCGCGGCAG ACGCTGGCGC GCAACCTGTT GCCGAAGGAC
GTCAACGCAC ATCCCACCGG CCTGCACTTG TGGATGACGC TGCCGGCCCA CTGGAATCGA
CAGTTGTTCG CGCTCGCGCT CGAGCAGCAG GGCGTGCTGG TGGCCTGCTC GGATGCGTTC
AGCGTGGATG CGAATCCCGT GGATGCGGTG CGTCTGTCGG TCGGCGGCGC GCGTAGCCAG
ACGGATCTGG CTCATGCGTT GCAGCGGATC GCCACGTTGC TGCGGGAGGA TCGCCGTCGA
GGCGTGCGGG CCATTGTCTA G
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| Protein sequence | MSDMKGERHV EWLRPLTPGA GPRYMQIADL IARAVQTGEL AVGDQIPSQR WLATQLGVDL
TTVTRAYTEA RNRGLISSFS GRGSFVAGVG EAGDEMRIDL SMNTPPQPAS GSMGDALKLA
IDEVLARQGI EAMSAYQDTW SGASIVQAGR AWLRPAVGAM AGQQELIVCA GTQAAIFSLL
QSRTQRGDAV LAEPLTYPGF LLTAQQLGLR VVALEVDQDG VLPDAIERSH RETGAQVIYL
NPTLQNPTAS TMPEHRREAI GAMLRKLGMT LIEDDPYRYL LNDAPPPIVT YEGGERAYYL
TSLSKCLWPS LRTSFVLLPR QHDAAMLQDA LRASSMGCSL LLTAVAEHWM RSGQARHLML
DIQREVRARQ TLARNLLPKD VNAHPTGLHL WMTLPAHWNR QLFALALEQQ GVLVACSDAF
SVDANPVDAV RLSVGGARSQ TDLAHALQRI ATLLREDRRR GVRAIV
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