Gene Rmet_4943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4943 
Symbol 
ID4041805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1608579 
End bp1609736 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content67% 
IMG OID637980364 
Productputative iron-containing alcohol dehydrogenase 
Protein accessionYP_587074 
Protein GI94313865 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.375402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.972058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGT TCCGTTTCCA GACCGTGCCG ACGGTCATCG TCGAGCTTGG CGCCGCGCGC 
CGGCTGGGAG CGTTGCTGCG CGAGGCCTTT CCGCAATCGC AACGCCTCTG CGTGGTAACC
GACGGCTTCC TCTCGAAGAG CGGCCTGCTC TCGCCGGCGC TCGATGACCT GGGCAAGCAC
GGCTGGCAGG TGACCCTGAT CGACGACGTG ATCGCCGACC CGCCCGAGCA CATCGTGCTC
GAGGCCACCG AGCGCGCGCG GCAGGCCGAT GCGGAAGTCG TACTCGGGCT CGGCGGCGGA
TCGTCGATGG ACGTCGCCAA GCTGATTGCC GTGCTGCTTC CTGCCGCGCA GTCGCTCAAG
GACATGTACG GCGTGAAGAA GGTCACGGGC ACGCGGCTGC CGCTCGTGCA GATGCCGACC
ACCGCCGGCA CCGGCTCGGA AGTGACTGCA GTGTCGATCG TCACCACGGG AGAGACCACC
AAGATGGGGG TGGTGGCGCC GCAGCTTCTG GCCGACCTCG CCATTCTCGA CGCCGAACTC
ACGCTTGGCC TGCCACGTGC GGCGACCGCG GCCACCGGTA TCGACGCGAT GGTGCACGCG
ATCGAGGCCT ATACGAGCGC GCATCTGAAG AACCCGATCT CGGACATGCT GGCCGTGCGC
GCGCTGGAAC TGCTGTCGCA GAACCTGATG CTCGCCTGCG ACAACGGCCA CGACCACGGC
GCGCGCGAAG CCATGCTGCT CGGCGCGATG TTCGCCGGCC AGGCCTTCGC CAATTCGCCG
GTGGCGGCCG TGCACGCGCT GGCCTATCCG ATCGGCGGCA TCTTCCATGT CGCGCACGGG
CTCTCCAACG CGCTCGTGCT GCCGCACGTC ATGAAGTTCA ACGCGCCGGC AGCCAGCAAG
CTGTATGCGG AACTGGCCGA CGTGATACTG CCGGGCACCA CCGGTAGCTG CGAAACCAAG
ACGGCCGCGC TGATCGCCCA TATCGAGGGA CTGGTGCTGG CCACGGGCAT CCCGCGCACA
TTGCGCGAGG TTGGCGTCAA GGAAAATGAT CTGGGCCGTC TGGCCCGCGA TGCAATGCTG
CAGACACGCC TGCTGGTCAA CAATCCGCGC GAGGTCACCG AGGCCGACGC ATTCGCGATC
TACAGCGCGG CATTCTGA
 
Protein sequence
MNPFRFQTVP TVIVELGAAR RLGALLREAF PQSQRLCVVT DGFLSKSGLL SPALDDLGKH 
GWQVTLIDDV IADPPEHIVL EATERARQAD AEVVLGLGGG SSMDVAKLIA VLLPAAQSLK
DMYGVKKVTG TRLPLVQMPT TAGTGSEVTA VSIVTTGETT KMGVVAPQLL ADLAILDAEL
TLGLPRAATA ATGIDAMVHA IEAYTSAHLK NPISDMLAVR ALELLSQNLM LACDNGHDHG
AREAMLLGAM FAGQAFANSP VAAVHALAYP IGGIFHVAHG LSNALVLPHV MKFNAPAASK
LYAELADVIL PGTTGSCETK TAALIAHIEG LVLATGIPRT LREVGVKEND LGRLARDAML
QTRLLVNNPR EVTEADAFAI YSAAF