| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4940 |
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| Symbol | |
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| ID | 4041802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1604923 |
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| End bp | 1605951 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980361 |
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| Product | peptidase U32 |
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| Protein accession | YP_587071 |
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| Protein GI | 94313862 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.66387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAC CCTTGGCGGC GCCCGTGCGC CGCCCTCAAC TTGTCGCACC CGCAGGCTCG
CTAGCAGCGC TGCGCATGGC GTTGCAGCAC GGCGCCGACG CGGTGTATCT GGGCCTGCGC
GATGCCACCA ACGCGCGCAA CTTCGGCGGT CTGAATTTCA GCGAGGACGA TATCCGCACC
GGTGTGGCCG AGGCCCACGC ATGCGGTGCC GAAGTGCTGT TCGCTATCAA CACGTTCGCG
CAGATGGGCC ACGTCGAGCA ATGGCACCAT GCCGTCGACG CGGCCGCCGC GCTCGGCGCG
GATGCGGTCA TCATGGCCGA CCCCGGTCTG ATTGCCTATG CCGCGAAACG CCATCCGTCC
CTGCGCATCC ACCTTTCCGT GCAGGGCTCC GCCACCCACG CCGATGCAAT CGAGCTGATG
CGCGAGCAGT TCGGCATCCG GCGCGTCGTG TTGCCGCGAG TGCTCACGGT CACACAGATT
GCGAAGCTTG CCCGCCAGAC CGATATCGAA CTTGAAGTCT TTGGATTCGG CAGCCTCTGC
GTGATGGCGG AGGGCCGGTG CCTGCTGTCG TCCTACGCTA CCGGCGACTC GCCTAATAAC
AAGGGCGTCT GCTCTCCGGC CCATGCGGTG CGCTGGGACG AACAGGACGG CACGATGCAG
GCGCGACTGT CCGGCATCCT GATCGACAGC TACGCCCCTG GCGAGCCGGC GGGCTATCCG
ACCCTCTGCA AGGGCCGATT CACGGTCGAA GGCGAGCGCG GCTACGTGCT GGAGGAACCC
ACCAGTCTCA ATGCGGTATC GCTGCTGCCC ACTCTGATCG ACATTGGCAT CGCCGCGATC
AAGATCGAAG GCCGGCAGCG CAGCCCGCGC TACGTCGCCG ACGTGGTGGG TGTGCTGCGC
GCGGCCATCG ACGATGCATG CCGCGATCCG AAGCGCTTCG CGCCGCGCCA GGAATGGCAG
GCCACGCTGG GACGCCACGC CGAAGGCGAC CAGGTCACGC AAGGCGCGTA CGAGCGGCCC
TGGCGCTGA
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| Protein sequence | MNPPLAAPVR RPQLVAPAGS LAALRMALQH GADAVYLGLR DATNARNFGG LNFSEDDIRT
GVAEAHACGA EVLFAINTFA QMGHVEQWHH AVDAAAALGA DAVIMADPGL IAYAAKRHPS
LRIHLSVQGS ATHADAIELM REQFGIRRVV LPRVLTVTQI AKLARQTDIE LEVFGFGSLC
VMAEGRCLLS SYATGDSPNN KGVCSPAHAV RWDEQDGTMQ ARLSGILIDS YAPGEPAGYP
TLCKGRFTVE GERGYVLEEP TSLNAVSLLP TLIDIGIAAI KIEGRQRSPR YVADVVGVLR
AAIDDACRDP KRFAPRQEWQ ATLGRHAEGD QVTQGAYERP WR
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