| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4939 |
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| Symbol | |
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| ID | 4041801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1603969 |
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| End bp | 1604889 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980360 |
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| Product | peptidase U32 |
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| Protein accession | YP_587070 |
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| Protein GI | 94313861 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.443584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATGC CCACACAGCA ATCTCCCTTG TTTCGAATTT CCCTCGGCCC CTTGCTTTAC
TACTGGCCAC GCGCGACGGT GCTGCAGTTC TACGCGTCGG TCGCGGACAG CCCCGTCGAC
CGTGTTCATC TCGGCGAAGC CGTCTGCACG CGGCGGCACG AATTGCGCCA TGCGGACTGG
CTCGAAATCG CGCAGATGTT GCGCGAGGCA GGCAAGCAGG TGGTGTTGTC GACGCCGGTG
CTGGTCGAAT CCGACAGCGA TATCGCAGTC ATGCGCCGGG TTTGCGGGCA GGACGACTAC
CTGGTCGAAG CCAACGACCT TGGCGCGGTG CGCTGCATGG GCGGGCGTCC GTTCGTGGGC
GGCCCACACC TGAACGTCTA TCAGGGCGAC ACGCTGGCAT GGCTGGCATC GCTTGGCGCG
GTAGGTTGCA CGGTGCCGGT CGAAATGGAT GGCCGCACGA TGGCCGCGCT GGCCGCGGCG
CGACCGGCGG GTCTTGATCT GGAAGCGCTG GTCTGGGGGC GTATGCCGCT GGCGTTCTCC
GCGCGCTGCT TTACCGCACG CCATCACCGT CTGCGTAAGG ACGCTTGCGA ATTCCGCTGC
CTGGACTATC CAGACGGGCT GGTGGCCGAC ACGGGCGAGG GGCAGGCGTT CTTCACGCTC
AACGGCATCC AGACGCAGTC GGCCACTTGC CTCGATCTCT GCGCCGAAGT GTCGCGGATG
GCAGAGGCCG GTGTTGGTCT GATGCGTGTC AGCGCCCATT CCACAGGCAC TTTCGAAGCG
ATTGCCCATC TCGATGGCAT TCGCCACGGA ATGCCGGCGG CGCCGAGTCC GGTCATGCCT
GCGGACGCGG CACCCAGTAA CGGGTACTGG ACGGGCAAGC CGGGCATTCG ATGGATTGAG
AGCGAGGAGG CTACGGCATG A
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| Protein sequence | MAMPTQQSPL FRISLGPLLY YWPRATVLQF YASVADSPVD RVHLGEAVCT RRHELRHADW
LEIAQMLREA GKQVVLSTPV LVESDSDIAV MRRVCGQDDY LVEANDLGAV RCMGGRPFVG
GPHLNVYQGD TLAWLASLGA VGCTVPVEMD GRTMAALAAA RPAGLDLEAL VWGRMPLAFS
ARCFTARHHR LRKDACEFRC LDYPDGLVAD TGEGQAFFTL NGIQTQSATC LDLCAEVSRM
AEAGVGLMRV SAHSTGTFEA IAHLDGIRHG MPAAPSPVMP ADAAPSNGYW TGKPGIRWIE
SEEATA
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