Gene Rmet_4932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4932 
SymbolthcB 
ID4041794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1595254 
End bp1597596 
Gene Length2343 bp 
Protein Length780 aa 
Translation table11 
GC content65% 
IMG OID637980353 
Productferredoxin, cytochrome P450 
Protein accessionYP_587063 
Protein GI94313854 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGA CGAACGCACC CGCCAGCAGT GGAAGCTGCC CGATCGACCA CAGCGCCTTG 
CGCGCGCCCA ACGGTTGCCC GATCAGCCAC CAGGCGGCGG CGTTCGATCC CTTCGAGGAC
GGCTATCAGC AGGACCCGCC CGAGTACGTG CGTTGGTCGC GCGCGCAGGA GCCGGTGTTC
TACAGTCCGA AGCTCGGCTA CTGGGTGGTG ACGCGCTACG ACGACATCAA GGCGATCTTT
CGCGACAACA TCACCTTCAG CCCGTCAATT GCGCTCGAGA AGATCACGCC CACGGGTGAG
GCGGCCAATG CGGTGCTGGC CTCGTACGGC TACGCGATGA ATCGCACGCT CGTCAACGAA
GACGAGCCCG CGCACATGCC GCGCCGCCGC GCGTTGATGG AGCCGTTCAC GCCCGCCGAA
CTGGCCCATC ACGAACCGAT GGTGCGCAAG CTCACACGCG AATACGTCGA CCGTTTCATC
GACACCGGCC GCGCGGATCT GGTGGACGAG ATGCTCTGGG AGGTACCGCT GACGGTGGCG
CTGCATTTCC TCGGCGTGCC CGAGGAAGAC ATGGACCTGT TACGCCAGTA CTCGATCGCC
CATACGGTCA ATACATGGGG CCGCCCGAAG CCCGAGGAGC AGGTGGCCGT GGCCCACGCT
GTGGGCAACT TCTGGCAACT GGCCGGCCGC ATTCTCGACA AGATGCGCGA AGATCCGTCC
GGCCCGGGCT GGATGCAGTA CGGCCTGCGC AAGCAGCGCG AGTTGCCCGA GGTGGTCACC
GATTCGTACC TGCACTCGAT GATGATGGCC GGCATCGTGG CCGCGCACGA GACCACGGCC
AATGCATCGG CCAACGCGAT CAAGCTGCTG CTGCAACATC CCGATGTCTG GCGGGAGATC
TGCGAAGACC CGGCATTGAT TCCAAACGCG GTGGAAGAAT GCCTGCGGCA CAACGGCTCG
GTGGCCGCCT GGCGGCGCCT TGTCACGCGC GACACCGAAG TGGGCGGCAT GTCGCTCGCG
GCTGGCAGCA AATTGCTGAT CGTCACGTCG TCGGCCAACC ACGACGAACA TCATTTCGCC
GATGCCGATC TGTTCGACAT CCATCGTGAC AATGCCAGCG ACCAGCTTAC GTTCGGCTAC
GGCTCGCACC AGTGCATGGG AAAAAACCTC GCGCGCATGG AGATGCAGAT CTTCCTGGAG
GAACTGACCA GCCGGCTGCC CCATATGCGT CTGGCCGGGC AGCGCTTCAC CTACGTGCCG
AACACCTCGT TCCGTGGCCC GGAGCATCTC TGGGTCGAAT GGGACCCGGC ACGCAACCCC
GAACGGACCG ATCCGACGGT GCTGGCGCCA CGTGACGCGG TCCGCATCGG CGAACCGACT
GGCGGCACCA CCGGCCGCAC GCTCATTGTC GAGCGCGTCG AGACGGCCGC GCAGGGTGTG
TCGCGGATCC GCCTGGTTTC GCCCGATGGT CGCGCACTAC CGCGCTGGTC GCCGGGCTCG
CATATCGACA TCGAATGCGG CCACACCGGC ATCTCGCGCC AGTATTCGCT GTGCGGCGAC
CCCGCCGATA CCAGCGCCTT CGAGATCGCG GTGCTGCGCG AGCCCGAAAG CCGTGGTGGA
TCGGCGTGGA TTCATGCCAG CCTGCGCGCA GGCGACAAGC TCAAGGTGCG CGGCCCGCGC
AATCACTTCC GGCTCGACGA GACCTGCCGT CGCGCGATCT TCATCGCCGG TGGCATTGGC
GTGACTCCGG TCAGCGCCAT GGCAAGGCGT GCGAAAGAAC TGGGCGTCGA CTACACCTTC
CACTATTGCG GCCGCAGCCG TGCCTCCATG GCGATGATCG ATGAACTGCG CGCCCTGCAT
GGTGATCGCG TGCGGATTCA TGCCGCGGAT GAAGGCCAGC GCGCCGATCT CGCGCAAGTG
CTCGGCGCAC CCGATGCGAA CACGCAGATC TACGCTTGTG GACCGGCCCG GATGATCGAG
GCGCTGGAAG CCCTGTGCGC GACATGGCCC GAGGATTCGC TGCGCGTCGA ACACTTCAGT
TCGAAACTTG GAACGCTCGA TCCCTCCAGG GAACAGCCGT TTGCGGTCGA ACTGAAGGAC
TCGGGGCTGA CGCTTGAAGT TCCTCCGGAC CAGACGCTGC TCGCCACCCT GCGCGCCGCG
AACATCGACG TGCAAAGCGA TTGCGAGGAA GGCCTGTGTG GATCGTGTGA AGTGCGCGTG
CTGGCCGGCG AGATCGACCA CCGCGACGTC GTGCTGACGC GCGGCGAGCG TGATGCGAAC
AACCGGATGA TGGCCTGCTG CTCGCGAGCG GCGAAGGGCG GAAAGATCGT GCTGGGGCTG
TAA
 
Protein sequence
MPQTNAPASS GSCPIDHSAL RAPNGCPISH QAAAFDPFED GYQQDPPEYV RWSRAQEPVF 
YSPKLGYWVV TRYDDIKAIF RDNITFSPSI ALEKITPTGE AANAVLASYG YAMNRTLVNE
DEPAHMPRRR ALMEPFTPAE LAHHEPMVRK LTREYVDRFI DTGRADLVDE MLWEVPLTVA
LHFLGVPEED MDLLRQYSIA HTVNTWGRPK PEEQVAVAHA VGNFWQLAGR ILDKMREDPS
GPGWMQYGLR KQRELPEVVT DSYLHSMMMA GIVAAHETTA NASANAIKLL LQHPDVWREI
CEDPALIPNA VEECLRHNGS VAAWRRLVTR DTEVGGMSLA AGSKLLIVTS SANHDEHHFA
DADLFDIHRD NASDQLTFGY GSHQCMGKNL ARMEMQIFLE ELTSRLPHMR LAGQRFTYVP
NTSFRGPEHL WVEWDPARNP ERTDPTVLAP RDAVRIGEPT GGTTGRTLIV ERVETAAQGV
SRIRLVSPDG RALPRWSPGS HIDIECGHTG ISRQYSLCGD PADTSAFEIA VLREPESRGG
SAWIHASLRA GDKLKVRGPR NHFRLDETCR RAIFIAGGIG VTPVSAMARR AKELGVDYTF
HYCGRSRASM AMIDELRALH GDRVRIHAAD EGQRADLAQV LGAPDANTQI YACGPARMIE
ALEALCATWP EDSLRVEHFS SKLGTLDPSR EQPFAVELKD SGLTLEVPPD QTLLATLRAA
NIDVQSDCEE GLCGSCEVRV LAGEIDHRDV VLTRGERDAN NRMMACCSRA AKGGKIVLGL