| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4930 |
|---|
| Symbol | |
|---|
| ID | 4041792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1593295 |
|---|
| End bp | 1594110 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637980351 |
|---|
| Product | putative IclR family transcriptional regulator |
|---|
| Protein accession | YP_587061 |
|---|
| Protein GI | 94313852 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.622933 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCA TACCTGCCGA ATCCACCCCC GCACCGCGCC CGCGAGCGCG ACGCCAGCGC
GTGCAGGCTG CCGAGACCGG CATGGCCGTG CTCAAGGGGT TGGCCCGTCT GGGCGGCCGC
GCCAGCCTGA CGGCCATCGC CGCGCAGCTC GACGAAAGTC CGGCCAAAGT GCACCGATAT
CTGGTGAGCC TGATGGAGGA AGGGTTTGTG GCGCAGGAGG CAGGCACGCA GCAGTACCAC
CTCGGGATCG AAGCGCTGCA GATCGGGCTG GCCGCGATGC GGCAGGCCGA TCCGCTGCGG
CTGTCGGAAG CCGCCCTGAT CCGCCTGCGC GAGCGGCTGG AAGTGACCTG CTTCGTCGCG
GTGATGGGAA CCCGCGGGGC GACCATCGTA CGCATTGAGG AACCGGGTTT GCCGGTCACG
GTGAACGCGC GCGTCGGTTC GGTGATGCCA TTGCTGTCTT CGGCCACCGG ACGCGTGTTT
CTGGGACTGC TCGATGAATC CAGCGTGGAG GCACTGGCGC AGGAGGAACT GGAGATGCTG
CCGCCTGACC GAAGGGCGCT GCTCGATGCT GTCGATCCGC TCGGCAAGTT GCGCGAGCCC
GTTCGCGCAC AAGACTGCGC ATCGGTGCGT GATACGAACC TGAAGGGCAT CAGCGCCGTG
GCGGCGCCGG TGCGCGACTA CACGGGCCGT GTATGCGCGG TGCTGACGGC GCTGGGCGCG
ACCGGTGGGT TCGATCCTTC GATCGACGGA CCAGTCGGCC GCGCCGTGCG CGAAGAAGCC
GCGGCGATCA GCGCGTTGCT GGGCTACGCC GCGTAA
|
|---|
| Protein sequence | MPAIPAESTP APRPRARRQR VQAAETGMAV LKGLARLGGR ASLTAIAAQL DESPAKVHRY
LVSLMEEGFV AQEAGTQQYH LGIEALQIGL AAMRQADPLR LSEAALIRLR ERLEVTCFVA
VMGTRGATIV RIEEPGLPVT VNARVGSVMP LLSSATGRVF LGLLDESSVE ALAQEELEML
PPDRRALLDA VDPLGKLREP VRAQDCASVR DTNLKGISAV AAPVRDYTGR VCAVLTALGA
TGGFDPSIDG PVGRAVREEA AAISALLGYA A
|
|---|
| |