| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4927 |
|---|
| Symbol | tyrB |
|---|
| ID | 4041789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 1589611 |
|---|
| End bp | 1590807 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637980348 |
|---|
| Product | aromatic amino acid aminotransferase |
|---|
| Protein accession | YP_587058 |
|---|
| Protein GI | 94313849 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.177363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.577317 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAC ATATAGAAGC CTTTCCGGGT GACCCGATCC TCTCGCTCAA CGAGGACTTC
CAGCAGGACC CGCGTACCAA CAAGGTCAAT CTGAGCATCG GCATCTACTT CGACGACGAA
GGCCGCCTGC CGGTGATGAA GGCCGTGGCG GAAGCCGAGG CCGCGCTGCT GTCGGACATG
GGTCCGCGCC CGTACCTGCC GATGTCCGGC ATGGCCGCGT ATCGTCAGGC CGTGCAGGCG
CTGGTGTTCG GCGAGGATTG CGCCGCCCGC GCCGAAGGCC GCGTCGCCAC GCTGCAGACG
CTGGGCGGCT CGGGCGCGCT GCGCGTCGGC GCCGATTTCC TGAAGCGCTA CTTCCCGAAG
GCGGAGATGT GGATCAGCGA TCCGAGCTGG GAGAATCACC GCGTGGTCTT CGAGCGTGCC
GGCTTCAAGG TCAACACTTA CCCGTACTAC GATCCGGCCA CCGGCGGCCT GAAATTCGAC
GCGATGCTTG CCGCGATCGA AGCGATCCCG CAAGGCGACA TCGTGCTGCT GCACGCGTGC
TGCCACAACC CGACCGGCGT CGACCTGAAC CAGGACCAGT GGCGCCAGGT GATCGGCGTG
CTCAAGGCGC GCAAGCTGCT GCCGTTCGTC GACATGGCCT ACCAGGGTTT CGGCTCGGGC
CTGGACGATG ACGCCTTCGC CGTGCGCGAA CTGGCCCGCC AGAATGTGCC CTGCCTGGTG
GCCAATTCGT TCTCGAAGAA CTTCTCGCTG TACGGCGAGC GTTGCGGCGG CCTTTCGGTG
GTCTGCCAAA GCGCCGACGA AGCCAGCCGT GTGCTGGGCC AGCTTACCGG CGCCGTGCGC
GCCAACTACA GCAACCCGCC GACCCACGGC GCGCGCGTGG TGGCCCGTGT GCTGACCACG
CCGGCGCTGC GCGCGAACTG GGAGCAGGAA CTGGCCGCGA TGTGCCAGCG CATCACCCGT
ATGCGCCAGG CCATCCACGA CCACCTGCGC GAGCATGTGA GCGGCGAAAA GCTCTCGCGC
TACATCACCC AGCGCGGCAT GTTCACGTAC ACCGGTCTGT CGGCCGATCA GGTCGACCGC
CTGAAGAACG AGCACGGCGT GTACGTGCTG CGCTCGGGCC GCATGTGCGT GGCCGGTCTG
AACGAGCGCA ACGTGGGCGT CGTCGCCAAC GCCATCGGGC AGGTGCTGAA GGCCTGA
|
|---|
| Protein sequence | MFEHIEAFPG DPILSLNEDF QQDPRTNKVN LSIGIYFDDE GRLPVMKAVA EAEAALLSDM
GPRPYLPMSG MAAYRQAVQA LVFGEDCAAR AEGRVATLQT LGGSGALRVG ADFLKRYFPK
AEMWISDPSW ENHRVVFERA GFKVNTYPYY DPATGGLKFD AMLAAIEAIP QGDIVLLHAC
CHNPTGVDLN QDQWRQVIGV LKARKLLPFV DMAYQGFGSG LDDDAFAVRE LARQNVPCLV
ANSFSKNFSL YGERCGGLSV VCQSADEASR VLGQLTGAVR ANYSNPPTHG ARVVARVLTT
PALRANWEQE LAAMCQRITR MRQAIHDHLR EHVSGEKLSR YITQRGMFTY TGLSADQVDR
LKNEHGVYVL RSGRMCVAGL NERNVGVVAN AIGQVLKA
|
|---|
| |