Gene Rmet_4926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4926 
SymbolaroP 
ID4041788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1588165 
End bp1589553 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content63% 
IMG OID637980347 
Productaromatic amino acid transport protein 
Protein accessionYP_587057 
Protein GI94313848 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.262664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.164977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCTC CCGACAATCA AGGCACGCTC AAGCGTGGCC TGAAGAATCG TCACATCCAG 
CTCATCGCGC TGGGCGGCGC CATCGGCACC GGCCTGTTCC TGGGCATCGC CCAGACCATC
AAGCTGGCCG GCCCCTCGGT GCTGCTGGGC TACGCGCTGG CCGGCGTGGT CGCCTTCTTC
ATCATGCGCC AGCTCGGCGA AATGGTCGTG GACGAGCCCG TCGCCGGCTC GTTCAGCTAC
TTCGCCAACA AGTACTGCGG ACACTTCGCC GGCTTCATGT CCGGCTGGAA CTACTGGGTG
CTCTACATCC TCGTCAGCAT GGCCGAGCTA TCGGCCGTCG GCATCTACGT CCAGTACTGG
TGGCCCGGCA TTCCGACCTG GATTTCCGCG CTGGCCTTCT TCCTGATCAT CAACGCGATC
AACCTTGCCA GCGTGAAGTC GTTCGGCGAG ATGGAATTCT GGTTCTCGAT CATCAAGGTG
GCGGCCATCG TCGGCATGAT CGGTTTCGGC GGCTACCTGC TGGCCACCGG CACCGCGGGC
CCCGACGCCA GCATCGCCAA CCTGTGGCAA CACGGCGGCT TCTTCCCGAA CGGCTTCAGC
GGCCTGGTGA TGGCCATGGC TGTGATCATG TTCTCGTTTG GCGGCCTCGA ACTCGTGGGC
ATCACCGCTG CGGAAGCAGA CAGCCCCGAG AAGAGCATCC CGAAGGCGAC CAACCAGGTC
ATCTACCGCA TCCTGATCTT CTACGTCGGC GCGCTGGCCG TGCTGCTGTC GCTGTATCCG
TGGGAAAAGG TCGTGACCGG TGGCAGCCCG TTCGTGCTGA TCTTCCACGC AATGAACAGC
AACGTGGTAG CCACCGTGCT CAATATCGTG GTGCTGACCG CCGCCCTGTC GGTCTACAAC
AGCGGCGTCT ATTGCAACAG CCGCATGCTG CTGGGCCTGG CGCAGCAAGG CAACGCCCCG
CGCTCGCTGA TGCGCGTGAA CCGCCGCGGC ATTCCGCTGA CCGCGCTGGC CGTCTCGGCC
ATCGCCACCG GCATCTGCGT GGTGATCAAC TACTTCATGC CCGGCGAGGC CTTCGAACTG
CTGATGGGCC TGGTGGTCTC GGCCCTGATC ATCAACTGGG CGATGATCAG CATCATCCAC
CTGATGTTCC GTCGCGCCAA GGCAGCCGCC GGCAAGACCA CGCGCTTCCA GAGCCTGGGC
TACCCGCTGA CCAACTACGT GACGCTGGCC TTCCTGGCAG GCATCCTCGT GGTGATGTTC
CTGACGCCTG GCCTGCGCAT CTCGGTCTAC CTGATTCCGG TATGGCTTGG CGTACTTGGC
GTAAGCTATC GCCTCCGGCA GAAAAAGGCC GGTTCGGCCA TGCCCGCCGC CAGCGCCCAG
ATCCAGTAA
 
Protein sequence
MHAPDNQGTL KRGLKNRHIQ LIALGGAIGT GLFLGIAQTI KLAGPSVLLG YALAGVVAFF 
IMRQLGEMVV DEPVAGSFSY FANKYCGHFA GFMSGWNYWV LYILVSMAEL SAVGIYVQYW
WPGIPTWISA LAFFLIINAI NLASVKSFGE MEFWFSIIKV AAIVGMIGFG GYLLATGTAG
PDASIANLWQ HGGFFPNGFS GLVMAMAVIM FSFGGLELVG ITAAEADSPE KSIPKATNQV
IYRILIFYVG ALAVLLSLYP WEKVVTGGSP FVLIFHAMNS NVVATVLNIV VLTAALSVYN
SGVYCNSRML LGLAQQGNAP RSLMRVNRRG IPLTALAVSA IATGICVVIN YFMPGEAFEL
LMGLVVSALI INWAMISIIH LMFRRAKAAA GKTTRFQSLG YPLTNYVTLA FLAGILVVMF
LTPGLRISVY LIPVWLGVLG VSYRLRQKKA GSAMPAASAQ IQ