Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4926 |
Symbol | aroP |
ID | 4041788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1588165 |
End bp | 1589553 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637980347 |
Product | aromatic amino acid transport protein |
Protein accession | YP_587057 |
Protein GI | 94313848 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.262664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.164977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCTC CCGACAATCA AGGCACGCTC AAGCGTGGCC TGAAGAATCG TCACATCCAG CTCATCGCGC TGGGCGGCGC CATCGGCACC GGCCTGTTCC TGGGCATCGC CCAGACCATC AAGCTGGCCG GCCCCTCGGT GCTGCTGGGC TACGCGCTGG CCGGCGTGGT CGCCTTCTTC ATCATGCGCC AGCTCGGCGA AATGGTCGTG GACGAGCCCG TCGCCGGCTC GTTCAGCTAC TTCGCCAACA AGTACTGCGG ACACTTCGCC GGCTTCATGT CCGGCTGGAA CTACTGGGTG CTCTACATCC TCGTCAGCAT GGCCGAGCTA TCGGCCGTCG GCATCTACGT CCAGTACTGG TGGCCCGGCA TTCCGACCTG GATTTCCGCG CTGGCCTTCT TCCTGATCAT CAACGCGATC AACCTTGCCA GCGTGAAGTC GTTCGGCGAG ATGGAATTCT GGTTCTCGAT CATCAAGGTG GCGGCCATCG TCGGCATGAT CGGTTTCGGC GGCTACCTGC TGGCCACCGG CACCGCGGGC CCCGACGCCA GCATCGCCAA CCTGTGGCAA CACGGCGGCT TCTTCCCGAA CGGCTTCAGC GGCCTGGTGA TGGCCATGGC TGTGATCATG TTCTCGTTTG GCGGCCTCGA ACTCGTGGGC ATCACCGCTG CGGAAGCAGA CAGCCCCGAG AAGAGCATCC CGAAGGCGAC CAACCAGGTC ATCTACCGCA TCCTGATCTT CTACGTCGGC GCGCTGGCCG TGCTGCTGTC GCTGTATCCG TGGGAAAAGG TCGTGACCGG TGGCAGCCCG TTCGTGCTGA TCTTCCACGC AATGAACAGC AACGTGGTAG CCACCGTGCT CAATATCGTG GTGCTGACCG CCGCCCTGTC GGTCTACAAC AGCGGCGTCT ATTGCAACAG CCGCATGCTG CTGGGCCTGG CGCAGCAAGG CAACGCCCCG CGCTCGCTGA TGCGCGTGAA CCGCCGCGGC ATTCCGCTGA CCGCGCTGGC CGTCTCGGCC ATCGCCACCG GCATCTGCGT GGTGATCAAC TACTTCATGC CCGGCGAGGC CTTCGAACTG CTGATGGGCC TGGTGGTCTC GGCCCTGATC ATCAACTGGG CGATGATCAG CATCATCCAC CTGATGTTCC GTCGCGCCAA GGCAGCCGCC GGCAAGACCA CGCGCTTCCA GAGCCTGGGC TACCCGCTGA CCAACTACGT GACGCTGGCC TTCCTGGCAG GCATCCTCGT GGTGATGTTC CTGACGCCTG GCCTGCGCAT CTCGGTCTAC CTGATTCCGG TATGGCTTGG CGTACTTGGC GTAAGCTATC GCCTCCGGCA GAAAAAGGCC GGTTCGGCCA TGCCCGCCGC CAGCGCCCAG ATCCAGTAA
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Protein sequence | MHAPDNQGTL KRGLKNRHIQ LIALGGAIGT GLFLGIAQTI KLAGPSVLLG YALAGVVAFF IMRQLGEMVV DEPVAGSFSY FANKYCGHFA GFMSGWNYWV LYILVSMAEL SAVGIYVQYW WPGIPTWISA LAFFLIINAI NLASVKSFGE MEFWFSIIKV AAIVGMIGFG GYLLATGTAG PDASIANLWQ HGGFFPNGFS GLVMAMAVIM FSFGGLELVG ITAAEADSPE KSIPKATNQV IYRILIFYVG ALAVLLSLYP WEKVVTGGSP FVLIFHAMNS NVVATVLNIV VLTAALSVYN SGVYCNSRML LGLAQQGNAP RSLMRVNRRG IPLTALAVSA IATGICVVIN YFMPGEAFEL LMGLVVSALI INWAMISIIH LMFRRAKAAA GKTTRFQSLG YPLTNYVTLA FLAGILVVMF LTPGLRISVY LIPVWLGVLG VSYRLRQKKA GSAMPAASAQ IQ
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