Gene Rmet_4920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4920 
Symbol 
ID4041782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1583834 
End bp1584736 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content61% 
IMG OID637980341 
Productputative acyltransferase 
Protein accessionYP_587051 
Protein GI94313842 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.010992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACGCT TGCTTGCTTT CCTCCTGGGT ACGCTCAGTC TGACCTTGCT CGCCCTGAAT 
ACGATTTTCT GGTGCACACC GCTGTTCGTG CTCGCCGTGA TCAAATTGCT GTTGCCGTTC
GCCGGTGTGC GACGGCTGAT CGACCCCATT CTCAACCGCA TCGCGACAAG CTGGATCAGC
TGCAACGGCG TCTGGATCGG CCTGCTCCAG CGTGAGCCCT GGGCCGTGGA AGGTCTCGGT
TCGTTGCGCC CGGACAGCTG GTATCTGGTT AACTGCAACC ACCGCTCCTG GGTCGACATC
TTCGTGCTTC AGCGCGTATT GAACCGGCGG ATTCCACTGC TGAAGTTCTT CCTGAAGCAG
CAGCTCATCT ACGTGCCGGT TATTGGCCTG GCCTGGTGGG CGCTGGATTT CCCGTTCATG
CGGCGGCATT CGAAAGCCGC GCTGCGCAAG AATCCTGAAT TGCGCAACCA GGACCGCGAG
ACCACGCGAC GCGCGTGCGC CAAGTTCGCC CGGATTCCGA CCAGCGTGAT GACCTTTGCG
GAAGGCACGC GCTACACCCC GGTCAAGCAT CGGGCGCAAT CGTCCCCGTA TCGCCATCTG
CTCAAACCCA AGGCTGGCTC GCTCGCCATG GCGCTCAACG CGATGGGAGA ACAGTTCCAC
GCGCTGCTGG ATGTCAGCAT TGCCTACCCG GATGGCACAC CCACATTCTG GCAACTTGCC
AGCGGTCAGG CTGGCAGGGT AATGGTGCAT ATCCGGGAAC TGCCGATCCC GCCGGACTTC
TGCACCAGCG ACTACAACAG CGATGCAACC TTCCGCGGTG AATTTCACCG CTGGCTGGGG
CAGGTCTGGG AAGAAAAGGA CGAGCAGATT GCCACCATGC TCGCCCAGGC CGCTCGGCCC
TAG
 
Protein sequence
MKRLLAFLLG TLSLTLLALN TIFWCTPLFV LAVIKLLLPF AGVRRLIDPI LNRIATSWIS 
CNGVWIGLLQ REPWAVEGLG SLRPDSWYLV NCNHRSWVDI FVLQRVLNRR IPLLKFFLKQ
QLIYVPVIGL AWWALDFPFM RRHSKAALRK NPELRNQDRE TTRRACAKFA RIPTSVMTFA
EGTRYTPVKH RAQSSPYRHL LKPKAGSLAM ALNAMGEQFH ALLDVSIAYP DGTPTFWQLA
SGQAGRVMVH IRELPIPPDF CTSDYNSDAT FRGEFHRWLG QVWEEKDEQI ATMLAQAARP