Gene Rmet_4916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4916 
SymbolnosR 
ID4041778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1577272 
End bp1579890 
Gene Length2619 bp 
Protein Length872 aa 
Translation table11 
GC content63% 
IMG OID637980337 
Productputative transmembrane regulatory protein nosR 
Protein accessionYP_587047 
Protein GI94313838 
COG category[K] Transcription 
COG ID[COG3901] Regulator of nitric oxide reductase transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00666033 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGTCCG GTAATCAGGA GTTCGCGGCC AAGTTGGCCG CATTTTTTCT GCTGCTGTTC 
CTGTGCATGC AGACCGCGTT GGCGGATCAC GCCGCCTATG AGGCCGCGTT GCCGCCTAAT
CTGGGCGAGG CCAGGGATAT GTGCGCCCTT GTGCCATGCG CCGACGTGTT TCCCGGCGCC
GCGCGCTTTT CCGAGCGCAA GGGGCAGCCG CCGTATGTGG AAGCCTACGG TCCCGAGCAG
GATGGCAAGG CGCCGTTGCT GGGGTATGTG ATGCTGTCCA CCGATATCAC CGACATCCCG
GCGTACTCGG GCAAGCCGGT GGTGACGCTG ATCGGCATGG ATACGCAGGG GCACTATGTC
GGTATCAAGG TACTGAAGCA CTCGGAGCCG ATCCTGCTGC TGGGGATTCC GGAATCCGCG
TTGCTGAATT TCAACAAGCA GTACATCGGG AAGTCGGTCA AGGACAAGAT CGAAGTGGGG
CAGTCGCGGC CCGACGAGGG CGTGCTTGGG GTTGATGCGA TTTCCGGGGC GACCGTGACC
GTGATCGCCC AGAACCAGGT GCTGACCACC GCCACGGCAG CCGTGGCGCG CGAGGTCGGC
ATCCTTGAGC AGACACGACG CGAACCGGCG CGGTACGCCG TGACCGGCAA GCCCATGAGC
TGGGCCGATG CCGTCAAGCA AGGCAGCGTG CAGCGGTTGC TGATCCGGCC TGAACAGCTT
GGACTGGAAC GCGCTTCGGA GCCGTTTATC GAACTCTGGT TTGGCGATCT CAACCATCCT
GACCTGGGCG CGAGCCTGCT TGGCCAGTTG GCATGGAACA ACCTGCATTC GCAACTCAAG
CCTGACGAGC ACGCGATCTT CGTGATCCGG ACGGCGGGCG CGGCGTCGTT CAAGGGATCG
GGGTTCGTGC GCGGCGGCAT CTACGATCGC ATCCAGATCA AGCAGGGAGC CGACTCGTTC
ACGTTCCGCG ATTCGGACTA CCTGAACCTG TATGGACTGG AGGCCCAAGG CGCGCCTGCC
TATACCGAAT CAGCAATCTT CATCATCCGT TCGCCGGCAT TCTCTCCGGC GTATCCGTGG
AAGCTGTCGT TCCTGGGCAA CAGGGTCGAT CGCGCGTCAG GCGTGCGCAG TTTCGTCACG
TTCGATGCGC CGTACTGGAT GCCCGACAAG CTGCTTCAGG ATGGTCGTCC GCGCATCGAG
GAACCGGAGG CGCCCTGGCG TCGCATCTGG CGCGCGCGTG CAATCGAGAT CGCACTGTTC
GTGGCCCTGC TGCTGGTGGT CGGGGTGGTG TATGCCATGC GTGAGCGGTT GACACGCCGT
TCGACCCACA AGAACAAATG GCCGGTTAAC CTCTTCAAGT ACAGCGCGTG GGCCTTGAGC
ATCGGGTTTG TTGGCTTCGG CGCGATGGCG CAGCCCTCGA TCACGCAGGT GCTGACGTGG
TTCCACGCGT TGTTGTTCCA GTGGACCTGG TCGTTGTTCC TGACCGACCC GTTCATCTTC
TGCTTCTGGA TCTTCATCAT CCTGACCGTG TTCCTGTTCG GACGGGGCCT GTTCTGCGGC
TGGCTGTGCC CATTCGGATC GTTGTCAGAG GCCATCCACA AGATTGGCGG CCGGATCGGC
TTCAAACGCT GGCAGCGGCC GTTGCCGCGG GCCTGGCACG ACCGGCTGAA GTGGTTGAAG
TACGTCATCT TCTTTGGTTT GCTGACGGTG TCGGTGTTCT CCATGGGGCT GGCAGAGAAG
CTCGCGGAGG TGGAGCCGTT CAAGACGACG TTCCTTGTGG GTATCAGCAA CCGGGCCTGG
CCGTACGGGC TGTTCGTCTG CACGTTGCTC GGGCTGTCGC TGTTCATCGA GCGGCCGTAC
TGCAAGTACA TCTGCCCGCT TGGCGCGGCG CTGGCCATGC CGAGTACCTT CCGCTGGTTC
GGCCTGCGTC GCAAGCAGGA CTGCAATAGC TGCAAGGCAT GCGCGGTCGG TTGCGGCTCG
CAGGCGATCG ACGCGAATGG CCGTATCGAT CACCGCGAAT GCCTGCATTG CCTGGATTGC
ATGGTGCTGT ACACCGACGT CAAGGGCTGC CCGCCGCTGG CCAAGGAGCG CAAGCGGCGC
GAGCGGGACG GCCTGGAAAT CACGCCAATC GGCCTGGATG GCTACTACAT TCCGATCCAG
CCAGTGCCCA TGAACCCGCG CGTTGCGCAA GGGCCGGACC CGCGCATGCA GACCGACCGC
GTGTCCCCGC AGGGGCGCGA TGGGGCTCGT GGTGCGTATT GGCTCCTGCT GGAACTGCGC
GACCACCTCT GGCCATGGAG CAGCGACGGC TGGGCATCGG CCCGTGCCTT GCAGATTGCC
GGGATCTCGC TCGCGCTGGC GGCCAGTGTG GCGTGGGTGC TGGCCGCCAT GGGGCAGTTG
TCGTCGGGCG CCATCATCGC ATGGTGGTTC GGCTGGAGCG TCTACGAGGT GCTGATTCGC
TTGTCCGGCA AGCGGTACGT CAAGGATGGC CCGTGGTGGC GTTCCAACTA CCGGCGCGCG
ACCGTGATGG ACATGCTCAG CTACGTCGGA TTCAAGAACC TGCTGATTGG CGCCGCGTTG
TTCCTGATGC TGAAGGCGCT TGGGTTGCTC CAGGTATGA
 
Protein sequence
MQSGNQEFAA KLAAFFLLLF LCMQTALADH AAYEAALPPN LGEARDMCAL VPCADVFPGA 
ARFSERKGQP PYVEAYGPEQ DGKAPLLGYV MLSTDITDIP AYSGKPVVTL IGMDTQGHYV
GIKVLKHSEP ILLLGIPESA LLNFNKQYIG KSVKDKIEVG QSRPDEGVLG VDAISGATVT
VIAQNQVLTT ATAAVAREVG ILEQTRREPA RYAVTGKPMS WADAVKQGSV QRLLIRPEQL
GLERASEPFI ELWFGDLNHP DLGASLLGQL AWNNLHSQLK PDEHAIFVIR TAGAASFKGS
GFVRGGIYDR IQIKQGADSF TFRDSDYLNL YGLEAQGAPA YTESAIFIIR SPAFSPAYPW
KLSFLGNRVD RASGVRSFVT FDAPYWMPDK LLQDGRPRIE EPEAPWRRIW RARAIEIALF
VALLLVVGVV YAMRERLTRR STHKNKWPVN LFKYSAWALS IGFVGFGAMA QPSITQVLTW
FHALLFQWTW SLFLTDPFIF CFWIFIILTV FLFGRGLFCG WLCPFGSLSE AIHKIGGRIG
FKRWQRPLPR AWHDRLKWLK YVIFFGLLTV SVFSMGLAEK LAEVEPFKTT FLVGISNRAW
PYGLFVCTLL GLSLFIERPY CKYICPLGAA LAMPSTFRWF GLRRKQDCNS CKACAVGCGS
QAIDANGRID HRECLHCLDC MVLYTDVKGC PPLAKERKRR ERDGLEITPI GLDGYYIPIQ
PVPMNPRVAQ GPDPRMQTDR VSPQGRDGAR GAYWLLLELR DHLWPWSSDG WASARALQIA
GISLALAASV AWVLAAMGQL SSGAIIAWWF GWSVYEVLIR LSGKRYVKDG PWWRSNYRRA
TVMDMLSYVG FKNLLIGAAL FLMLKALGLL QV