Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4915 |
Symbol | nosD |
ID | 4041777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1575998 |
End bp | 1577275 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637980336 |
Product | putative periplasmic copper-binding precursor |
Protein accession | YP_587046 |
Protein GI | 94313837 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3420] Nitrous oxidase accessory protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00142909 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGTGGG TCCCGATTCT GATTCTTCTT GCAGGATGGC TGACGGGCGC GCAGGGCGCG ACCGTGCGGG TTGCGCCCGG GCGGCCGCTC CAGGCTGCGA TCGATGCGGC CCGGCCCGGC GACGTGCTGG AGATCGAACG CGCCACGTAC ACGGGCAACT TCGTGATCGG CAAGGCCCTG ACGCTGCGCG GGGTGGATCG TCCGACGATC AGCGGCGGCC AGCACGGGGA CACCTTGCGC GTCACCGCGT CGGACGTCGT TATCGAGGGA TTGATCGTGC GCGATTCCGG AGACAGCCTG AAGGACCAGA ACGCCGGCAT CAATATCCTG CCGGGGGCGC ACCGCGCCGT GGTGCGGCAT TGCGACCTGA CCTACAACCT GTTCGGCCTG TGGATCGAAA AGGCGGATGA CGTGCGCGTC GAAGGCAATA CCATCACCGG CAAGCGCGAC TACAACTCCG CGCAGCGCGG CAATGGCGTA CAGCTCTACA ACACCAAAGG CGCCCGCATT ATCGACAACA ACATCAGCTT TGTGCGCGAT GCGCTCTACG TCGATGTGTC GCACCACGCG ATCTTCAAGG GAAACCGGCT GCACCATAGC CGCTACGGCA CGCACTACAT GAACTCCTAC TACAACCTGT GGGAGGACAA TGACAGCTAC AACAATCGCG GCGGGCTGGC GTTGATGGAG GTGCGCGACC AGGTCGTGCG CAATAACCGG ACCTGGGGCA ATGCCGACCA CGGCATCATG CTGCGCACGC TGCAGGACTC GCGCGTGGAG AACAACGTCG TCGCCGACAA TGACCGTGGG TTCTTTATCT ACGACGTCGA ATACACGGAG TTGCGCGGCA ACCTGGTCAT CGGCAATCAG GTCGGCGTCC ACCTTTCGGC CGGATCAACG CGCAACGTGG TGCAGGGCAA CGACTTCATC GGCAACCGGG AACAGGTGCG CTATCTGGGC GCGCGCGATG AACCCTGGGG CGGGCGCAAA CCGTCGGAAC GCGATCAGGG CAACTTCTGG AGCGACTACC TCGGCTGGGA CCGCGATGGC GATGGCATTG GCGATCTGCC CTATGAGGCC AGCGATGTCC TCGACCGCCT GATCTGGCGT CATCCGGGCG TCCAGTTGCT ACTGGCCAGC CCTGCCGTGC AGGCACTGCG CTTCGTGAGC CGGCAGTTCC CCGTTCTGCG CGTGCCGACC GTCGTCGACG CCTACCCGCG GGCGCAGCCC GTCAACAAGA ATTGGAGTAC CTGGCGTGAC AGAGCACATT CACGTTGA
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Protein sequence | MKWVPILILL AGWLTGAQGA TVRVAPGRPL QAAIDAARPG DVLEIERATY TGNFVIGKAL TLRGVDRPTI SGGQHGDTLR VTASDVVIEG LIVRDSGDSL KDQNAGINIL PGAHRAVVRH CDLTYNLFGL WIEKADDVRV EGNTITGKRD YNSAQRGNGV QLYNTKGARI IDNNISFVRD ALYVDVSHHA IFKGNRLHHS RYGTHYMNSY YNLWEDNDSY NNRGGLALME VRDQVVRNNR TWGNADHGIM LRTLQDSRVE NNVVADNDRG FFIYDVEYTE LRGNLVIGNQ VGVHLSAGST RNVVQGNDFI GNREQVRYLG ARDEPWGGRK PSERDQGNFW SDYLGWDRDG DGIGDLPYEA SDVLDRLIWR HPGVQLLLAS PAVQALRFVS RQFPVLRVPT VVDAYPRAQP VNKNWSTWRD RAHSR
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