Gene Rmet_4915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4915 
SymbolnosD 
ID4041777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1575998 
End bp1577275 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content64% 
IMG OID637980336 
Productputative periplasmic copper-binding precursor 
Protein accessionYP_587046 
Protein GI94313837 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3420] Nitrous oxidase accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00142909 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTGGG TCCCGATTCT GATTCTTCTT GCAGGATGGC TGACGGGCGC GCAGGGCGCG 
ACCGTGCGGG TTGCGCCCGG GCGGCCGCTC CAGGCTGCGA TCGATGCGGC CCGGCCCGGC
GACGTGCTGG AGATCGAACG CGCCACGTAC ACGGGCAACT TCGTGATCGG CAAGGCCCTG
ACGCTGCGCG GGGTGGATCG TCCGACGATC AGCGGCGGCC AGCACGGGGA CACCTTGCGC
GTCACCGCGT CGGACGTCGT TATCGAGGGA TTGATCGTGC GCGATTCCGG AGACAGCCTG
AAGGACCAGA ACGCCGGCAT CAATATCCTG CCGGGGGCGC ACCGCGCCGT GGTGCGGCAT
TGCGACCTGA CCTACAACCT GTTCGGCCTG TGGATCGAAA AGGCGGATGA CGTGCGCGTC
GAAGGCAATA CCATCACCGG CAAGCGCGAC TACAACTCCG CGCAGCGCGG CAATGGCGTA
CAGCTCTACA ACACCAAAGG CGCCCGCATT ATCGACAACA ACATCAGCTT TGTGCGCGAT
GCGCTCTACG TCGATGTGTC GCACCACGCG ATCTTCAAGG GAAACCGGCT GCACCATAGC
CGCTACGGCA CGCACTACAT GAACTCCTAC TACAACCTGT GGGAGGACAA TGACAGCTAC
AACAATCGCG GCGGGCTGGC GTTGATGGAG GTGCGCGACC AGGTCGTGCG CAATAACCGG
ACCTGGGGCA ATGCCGACCA CGGCATCATG CTGCGCACGC TGCAGGACTC GCGCGTGGAG
AACAACGTCG TCGCCGACAA TGACCGTGGG TTCTTTATCT ACGACGTCGA ATACACGGAG
TTGCGCGGCA ACCTGGTCAT CGGCAATCAG GTCGGCGTCC ACCTTTCGGC CGGATCAACG
CGCAACGTGG TGCAGGGCAA CGACTTCATC GGCAACCGGG AACAGGTGCG CTATCTGGGC
GCGCGCGATG AACCCTGGGG CGGGCGCAAA CCGTCGGAAC GCGATCAGGG CAACTTCTGG
AGCGACTACC TCGGCTGGGA CCGCGATGGC GATGGCATTG GCGATCTGCC CTATGAGGCC
AGCGATGTCC TCGACCGCCT GATCTGGCGT CATCCGGGCG TCCAGTTGCT ACTGGCCAGC
CCTGCCGTGC AGGCACTGCG CTTCGTGAGC CGGCAGTTCC CCGTTCTGCG CGTGCCGACC
GTCGTCGACG CCTACCCGCG GGCGCAGCCC GTCAACAAGA ATTGGAGTAC CTGGCGTGAC
AGAGCACATT CACGTTGA
 
Protein sequence
MKWVPILILL AGWLTGAQGA TVRVAPGRPL QAAIDAARPG DVLEIERATY TGNFVIGKAL 
TLRGVDRPTI SGGQHGDTLR VTASDVVIEG LIVRDSGDSL KDQNAGINIL PGAHRAVVRH
CDLTYNLFGL WIEKADDVRV EGNTITGKRD YNSAQRGNGV QLYNTKGARI IDNNISFVRD
ALYVDVSHHA IFKGNRLHHS RYGTHYMNSY YNLWEDNDSY NNRGGLALME VRDQVVRNNR
TWGNADHGIM LRTLQDSRVE NNVVADNDRG FFIYDVEYTE LRGNLVIGNQ VGVHLSAGST
RNVVQGNDFI GNREQVRYLG ARDEPWGGRK PSERDQGNFW SDYLGWDRDG DGIGDLPYEA
SDVLDRLIWR HPGVQLLLAS PAVQALRFVS RQFPVLRVPT VVDAYPRAQP VNKNWSTWRD
RAHSR