Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4914 |
Symbol | nosF |
ID | 4041776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1575070 |
End bp | 1576020 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637980335 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_587045 |
Protein GI | 94313836 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000429083 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGACAGAGC ACATTCACGT TGAAGGGCAG GCCGCCATCG CGCTGCGTGG CGTTTGCAAG GACTATGGCG CTGTCCGGGC CGTCGACGAC GTCGATCTGG AAATCGGTTA CGGCGAACTG TTCGGGTTGA TCGGCCACAA CGGCGCGGGC AAGAGCACCT TGTTCAGGAT GATGCTGGGC CTGATCGCTG CCAGCGAAGG CGATATTCGC GTCGCCGGGG CATCCGTGGG TGGGGCCGCG TTCAGGGCCG CGCGCCGCCA GATCGGCTAT CTGCCGGAGA ATCTGGTGCT CTACGACAAC CTGAGCGGAC TCGAGACGCT GCGTTTCTTC GGCCGGATGA AAGGGGCGCC ATTGGCGGAT TGCGAGCTGC TGCTCGCGCG CGTAGGGCTG GCTGGCGCGG CGGAGAAGCC GGTGCGGGCC TATTCGAAGG GCATGCGGCA GCGGCTCGGC TTCGCGCAGG CGCTGCTGGG GTCGCCGCGC GTCGTTTTTC TCGACGAGCC CACCAATGGG CTGGATCCGG CGGCCATTCA CGACTTCTAC GCCATGCTCC AGGCGCTGCG CGAGCAGGGC GTCACCATCG TGATCACTTC CCACATTCTG GCGGAGTTGC AGCAACGGAT CGATCGCCTT GCCATCATGG GCAACGGACG CATCCTGGCC GTGGGCAGCG TGGCCGAGTT GCGCCGGCAG CTTGATCTGC CGGTGACGCT GGCATTGCGC GTCGAGCGCG GCGCGCGTGC CGCGTTGTGG CAGCACTTTG CGCCACTGCG CGCGCAGGGC ATCGAACTCG AGAACGGGCG CGCCGAGTAT GAGCTGATCC TGCGTTGCAG GCGGTCTCTC AAGATGCAGG TCCTGGGGGC GCTGCATCCC ATGGGCGGGC GTCTGCTCGA TCTGCAGATT CAGGAGCCGA CGCTGGAAGA CGTGTTCTTC GGATTGAAGG AGGCGGCGTG A
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Protein sequence | MTEHIHVEGQ AAIALRGVCK DYGAVRAVDD VDLEIGYGEL FGLIGHNGAG KSTLFRMMLG LIAASEGDIR VAGASVGGAA FRAARRQIGY LPENLVLYDN LSGLETLRFF GRMKGAPLAD CELLLARVGL AGAAEKPVRA YSKGMRQRLG FAQALLGSPR VVFLDEPTNG LDPAAIHDFY AMLQALREQG VTIVITSHIL AELQQRIDRL AIMGNGRILA VGSVAELRRQ LDLPVTLALR VERGARAALW QHFAPLRAQG IELENGRAEY ELILRCRRSL KMQVLGALHP MGGRLLDLQI QEPTLEDVFF GLKEAA
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