Gene Rmet_4914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4914 
SymbolnosF 
ID4041776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1575070 
End bp1576020 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content66% 
IMG OID637980335 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_587045 
Protein GI94313836 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000429083 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGACAGAGC ACATTCACGT TGAAGGGCAG GCCGCCATCG CGCTGCGTGG CGTTTGCAAG 
GACTATGGCG CTGTCCGGGC CGTCGACGAC GTCGATCTGG AAATCGGTTA CGGCGAACTG
TTCGGGTTGA TCGGCCACAA CGGCGCGGGC AAGAGCACCT TGTTCAGGAT GATGCTGGGC
CTGATCGCTG CCAGCGAAGG CGATATTCGC GTCGCCGGGG CATCCGTGGG TGGGGCCGCG
TTCAGGGCCG CGCGCCGCCA GATCGGCTAT CTGCCGGAGA ATCTGGTGCT CTACGACAAC
CTGAGCGGAC TCGAGACGCT GCGTTTCTTC GGCCGGATGA AAGGGGCGCC ATTGGCGGAT
TGCGAGCTGC TGCTCGCGCG CGTAGGGCTG GCTGGCGCGG CGGAGAAGCC GGTGCGGGCC
TATTCGAAGG GCATGCGGCA GCGGCTCGGC TTCGCGCAGG CGCTGCTGGG GTCGCCGCGC
GTCGTTTTTC TCGACGAGCC CACCAATGGG CTGGATCCGG CGGCCATTCA CGACTTCTAC
GCCATGCTCC AGGCGCTGCG CGAGCAGGGC GTCACCATCG TGATCACTTC CCACATTCTG
GCGGAGTTGC AGCAACGGAT CGATCGCCTT GCCATCATGG GCAACGGACG CATCCTGGCC
GTGGGCAGCG TGGCCGAGTT GCGCCGGCAG CTTGATCTGC CGGTGACGCT GGCATTGCGC
GTCGAGCGCG GCGCGCGTGC CGCGTTGTGG CAGCACTTTG CGCCACTGCG CGCGCAGGGC
ATCGAACTCG AGAACGGGCG CGCCGAGTAT GAGCTGATCC TGCGTTGCAG GCGGTCTCTC
AAGATGCAGG TCCTGGGGGC GCTGCATCCC ATGGGCGGGC GTCTGCTCGA TCTGCAGATT
CAGGAGCCGA CGCTGGAAGA CGTGTTCTTC GGATTGAAGG AGGCGGCGTG A
 
Protein sequence
MTEHIHVEGQ AAIALRGVCK DYGAVRAVDD VDLEIGYGEL FGLIGHNGAG KSTLFRMMLG 
LIAASEGDIR VAGASVGGAA FRAARRQIGY LPENLVLYDN LSGLETLRFF GRMKGAPLAD
CELLLARVGL AGAAEKPVRA YSKGMRQRLG FAQALLGSPR VVFLDEPTNG LDPAAIHDFY
AMLQALREQG VTIVITSHIL AELQQRIDRL AIMGNGRILA VGSVAELRRQ LDLPVTLALR
VERGARAALW QHFAPLRAQG IELENGRAEY ELILRCRRSL KMQVLGALHP MGGRLLDLQI
QEPTLEDVFF GLKEAA