Gene Rmet_4907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4907 
Symbol 
ID4041769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1569705 
End bp1570400 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content65% 
IMG OID637980328 
Productputative isomerase/hydrolase; putative Fumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_587038 
Protein GI94313829 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0128566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00145889 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAAT TCGTCATCCA GCCTGCCCCG CAGGCCAGCG TAGCCGTAGC GGGCAGCCAG 
GCCCGTTTCC CTATCCGCCG CGTGTTCTGC GTGGGGCGCA ACTACGCCGC CCACGCACGC
GAAATGGGCA AGGACCCCGA TCGCGAACCG CCGTTCTTCT TCACCAAGCC AGCCGATGCC
GTCGTGGCCG CTGAAGGCAC GGTGCCGCAT CCGCCGTTGA CGGAGAACCT CCACCACGAG
ATCGAGCTTG TTGTCGCGAT CGGCAAGGGC GGCACGAACG TCAGCCCGGC GCAGGCACTC
GACCTGGTGT GGGGCTACGC CGTGGGCGTG GACATGACGC GCCGTGACCT GCAGGACGTC
GCCAAGAAGA TGAGCCGCCC GTGGGACTGG TCGAAGGCCT TCGATGCGTC AGGCCCGTGC
GGTCCGCTGC ATGCGGCATC CAGCATCGGC CATCCGTCCA AGGGCGCGAT CTGGCTCAAG
GTCAATGGCG AAACGCGCCA GGAAGGCGAC CTGACCGAAC TGATCTGGCC TGTTGCCGAT
GTGATTGCCT ATATCTCGGA AGCCGTTGCA CTGGAACCGG GTGACCTGAT CTTCACCGGC
ACGCCGGCAG GTGTCGGCGC CCTGAACCCC GGCGACGTCG TCAGCGGCGG TGTCGAAGGT
ATTGGTGAAA TCACTTTCAC CATCGGCAAG CGCTAA
 
Protein sequence
MTEFVIQPAP QASVAVAGSQ ARFPIRRVFC VGRNYAAHAR EMGKDPDREP PFFFTKPADA 
VVAAEGTVPH PPLTENLHHE IELVVAIGKG GTNVSPAQAL DLVWGYAVGV DMTRRDLQDV
AKKMSRPWDW SKAFDASGPC GPLHAASSIG HPSKGAIWLK VNGETRQEGD LTELIWPVAD
VIAYISEAVA LEPGDLIFTG TPAGVGALNP GDVVSGGVEG IGEITFTIGK R