Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4907 |
Symbol | |
ID | 4041769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1569705 |
End bp | 1570400 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637980328 |
Product | putative isomerase/hydrolase; putative Fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_587038 |
Protein GI | 94313829 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0128566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00145889 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGAAT TCGTCATCCA GCCTGCCCCG CAGGCCAGCG TAGCCGTAGC GGGCAGCCAG GCCCGTTTCC CTATCCGCCG CGTGTTCTGC GTGGGGCGCA ACTACGCCGC CCACGCACGC GAAATGGGCA AGGACCCCGA TCGCGAACCG CCGTTCTTCT TCACCAAGCC AGCCGATGCC GTCGTGGCCG CTGAAGGCAC GGTGCCGCAT CCGCCGTTGA CGGAGAACCT CCACCACGAG ATCGAGCTTG TTGTCGCGAT CGGCAAGGGC GGCACGAACG TCAGCCCGGC GCAGGCACTC GACCTGGTGT GGGGCTACGC CGTGGGCGTG GACATGACGC GCCGTGACCT GCAGGACGTC GCCAAGAAGA TGAGCCGCCC GTGGGACTGG TCGAAGGCCT TCGATGCGTC AGGCCCGTGC GGTCCGCTGC ATGCGGCATC CAGCATCGGC CATCCGTCCA AGGGCGCGAT CTGGCTCAAG GTCAATGGCG AAACGCGCCA GGAAGGCGAC CTGACCGAAC TGATCTGGCC TGTTGCCGAT GTGATTGCCT ATATCTCGGA AGCCGTTGCA CTGGAACCGG GTGACCTGAT CTTCACCGGC ACGCCGGCAG GTGTCGGCGC CCTGAACCCC GGCGACGTCG TCAGCGGCGG TGTCGAAGGT ATTGGTGAAA TCACTTTCAC CATCGGCAAG CGCTAA
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Protein sequence | MTEFVIQPAP QASVAVAGSQ ARFPIRRVFC VGRNYAAHAR EMGKDPDREP PFFFTKPADA VVAAEGTVPH PPLTENLHHE IELVVAIGKG GTNVSPAQAL DLVWGYAVGV DMTRRDLQDV AKKMSRPWDW SKAFDASGPC GPLHAASSIG HPSKGAIWLK VNGETRQEGD LTELIWPVAD VIAYISEAVA LEPGDLIFTG TPAGVGALNP GDVVSGGVEG IGEITFTIGK R
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