| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4902 |
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| Symbol | |
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| ID | 4041764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1565363 |
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| End bp | 1566127 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980323 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_587033 |
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| Protein GI | 94313824 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.19521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.023029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAGC TCTTCGATAT GTCCGGCCGC GTCGCGGTCG TCACGGGGTC CACCAAGGGA
ATGGGTCTGG AAATGGCGCG AGCGCTCGGC GCATCCGGGG CCCGGGTGGT GGTGTCTGGG
CGCAACGCGG CGATCAGCGA AAAAGTTGCC GCCGCACTGA AGTCGGAGGG CATCGACGCC
ACTGGCCTCG CCTGCGACAT CGCCGATACC GCCAGCGTGC GGGCCTTTGC CGACCGGGTG
CTGGAGACGT TCGGCCGCGT GGACGCATTA GTCCTGAATG CCGCGGGCAG TGGTGTGGCC
GGTTCAATCC TGGAGCAGGG GCCTGAGGAC TTCGACGCGG TGATGGCGGG CAACGTGCGC
GGCAATCTCG TGCTCGTCAA CGCACTGGCG CCGCAGATGA TTTCCCGCAA CGACGGCTCG
ATCATCTTCA TGTCGAGCAT CGCGGCACGT CGGGGATCCG CGCTGTTGCC GCTGTACAGC
ATCTCGAAGG GGGCCGTCGA TCTGGCGATG CGCAGCCTCG CTCATACGCT CGGACCGCAC
AACATCAATG TGAACAGCAT CAATCCGGGG CCGGTCCGCA CCGATTTCTC GCGTGATGCG
CTATGGGGCA ACCCCGACCG CGAGAAGGCG TTGTCTGCCT CCATCCCGAT GCGGCGCATT
GCCGAGGCGC GCGACGTGGC GGGGTTGGCC GTGCTGCTGG CATCGCCCGC TGGACGCTAT
ATCTCCGGGC AGACGATCGG GCTCGACGGC GGCGCTACGG CTTGA
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| Protein sequence | MYKLFDMSGR VAVVTGSTKG MGLEMARALG ASGARVVVSG RNAAISEKVA AALKSEGIDA
TGLACDIADT ASVRAFADRV LETFGRVDAL VLNAAGSGVA GSILEQGPED FDAVMAGNVR
GNLVLVNALA PQMISRNDGS IIFMSSIAAR RGSALLPLYS ISKGAVDLAM RSLAHTLGPH
NINVNSINPG PVRTDFSRDA LWGNPDREKA LSASIPMRRI AEARDVAGLA VLLASPAGRY
ISGQTIGLDG GATA
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