Gene Rmet_4898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4898 
Symbol 
ID4041760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1562016 
End bp1562957 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content65% 
IMG OID637980319 
Productputative patatin-like phospholipase 
Protein accessionYP_587029 
Protein GI94313820 
COG category[R] General function prediction only 
COG ID[COG1752] Predicted esterase of the alpha-beta hydrolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0432192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA CTGCATTCGT ATTCGCCGGC GGTGGCAGCC TGGGCGCCAT CGAGGTCGGC 
ATGCTGCGGG AACTGGTGAA ATGGGGTGTG GCACCGGACC TTGTCATCGG CGCATCTGCG
GGGGCGATCA ACGGGGCCTA CTTTGCATGC AACCCCCATG CCGAAGGTAC CGCCAGGCTG
GAATCACTGT GGCGGAGCAT CACCAGGGCG GAAGTCTTGC CATGGTCGTG GCGCAGCATG
TTCGGGATGA TCGCTGGCAA CCGGGGACAC CTTGTGGAAT CCTTCGGTTT GCGGCGCCTG
CTCAATCGCA ACTTTGGCGC GGCCAGGCTC GAAGAGTCCG CCGTACCGCT TTATGTGGTC
GCCACGGACA TGCAGACAGG TGCCGAAGTC GTGCTCTCCG CGGGCAACAT CGTCGATGCA
GTGTTGGCCA GCGCCGCCAT TCCCGGTGTC TTTCCGCCGG TGGAAGTCGG TGGCCGCAAG
CTGATCGATG GTGGCGTCGC CAACAATACT CCTGTATCCA CCGCCATCCG GCTGGGCGCG
ACCCGCATCA TCGTGCTGCC AGCCGGCTTT GCCTGCGCCG AACGCAGGCC GCCACGCGGG
GCCGTCGAGC ACGCCTTCAA TGCCCTGTCG CTGCTAGTGG CGCGGCAGCT CGTGTATGAC
CTGGAACGCT GGTCGGAGCA GGCCCAGATC GCAGTGGTGC CACCGCTTTG CCCGCTAGAT
ATCTCGCCTT ATGACTACAC TCGCTGCGGC GAACTGATCG AGCGTGCAGC CGAGGCAACG
GTGGCCTGGC TGCGTGCCGA CGGCCTGTCC AGCCGACGCG TGCCGGGCGC GCTGGAGCCG
CATACGCACG ACGAAGCGTC GCCAAGCTGC AGCACAGATC TGCTTGGCCC CACCAGTGGA
CACGCCCATG CCAAGCAGCA TGGGCACGGC CATCCACACT GA
 
Protein sequence
MEKTAFVFAG GGSLGAIEVG MLRELVKWGV APDLVIGASA GAINGAYFAC NPHAEGTARL 
ESLWRSITRA EVLPWSWRSM FGMIAGNRGH LVESFGLRRL LNRNFGAARL EESAVPLYVV
ATDMQTGAEV VLSAGNIVDA VLASAAIPGV FPPVEVGGRK LIDGGVANNT PVSTAIRLGA
TRIIVLPAGF ACAERRPPRG AVEHAFNALS LLVARQLVYD LERWSEQAQI AVVPPLCPLD
ISPYDYTRCG ELIERAAEAT VAWLRADGLS SRRVPGALEP HTHDEASPSC STDLLGPTSG
HAHAKQHGHG HPH