Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4898 |
Symbol | |
ID | 4041760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1562016 |
End bp | 1562957 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637980319 |
Product | putative patatin-like phospholipase |
Protein accession | YP_587029 |
Protein GI | 94313820 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0432192 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGA CTGCATTCGT ATTCGCCGGC GGTGGCAGCC TGGGCGCCAT CGAGGTCGGC ATGCTGCGGG AACTGGTGAA ATGGGGTGTG GCACCGGACC TTGTCATCGG CGCATCTGCG GGGGCGATCA ACGGGGCCTA CTTTGCATGC AACCCCCATG CCGAAGGTAC CGCCAGGCTG GAATCACTGT GGCGGAGCAT CACCAGGGCG GAAGTCTTGC CATGGTCGTG GCGCAGCATG TTCGGGATGA TCGCTGGCAA CCGGGGACAC CTTGTGGAAT CCTTCGGTTT GCGGCGCCTG CTCAATCGCA ACTTTGGCGC GGCCAGGCTC GAAGAGTCCG CCGTACCGCT TTATGTGGTC GCCACGGACA TGCAGACAGG TGCCGAAGTC GTGCTCTCCG CGGGCAACAT CGTCGATGCA GTGTTGGCCA GCGCCGCCAT TCCCGGTGTC TTTCCGCCGG TGGAAGTCGG TGGCCGCAAG CTGATCGATG GTGGCGTCGC CAACAATACT CCTGTATCCA CCGCCATCCG GCTGGGCGCG ACCCGCATCA TCGTGCTGCC AGCCGGCTTT GCCTGCGCCG AACGCAGGCC GCCACGCGGG GCCGTCGAGC ACGCCTTCAA TGCCCTGTCG CTGCTAGTGG CGCGGCAGCT CGTGTATGAC CTGGAACGCT GGTCGGAGCA GGCCCAGATC GCAGTGGTGC CACCGCTTTG CCCGCTAGAT ATCTCGCCTT ATGACTACAC TCGCTGCGGC GAACTGATCG AGCGTGCAGC CGAGGCAACG GTGGCCTGGC TGCGTGCCGA CGGCCTGTCC AGCCGACGCG TGCCGGGCGC GCTGGAGCCG CATACGCACG ACGAAGCGTC GCCAAGCTGC AGCACAGATC TGCTTGGCCC CACCAGTGGA CACGCCCATG CCAAGCAGCA TGGGCACGGC CATCCACACT GA
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Protein sequence | MEKTAFVFAG GGSLGAIEVG MLRELVKWGV APDLVIGASA GAINGAYFAC NPHAEGTARL ESLWRSITRA EVLPWSWRSM FGMIAGNRGH LVESFGLRRL LNRNFGAARL EESAVPLYVV ATDMQTGAEV VLSAGNIVDA VLASAAIPGV FPPVEVGGRK LIDGGVANNT PVSTAIRLGA TRIIVLPAGF ACAERRPPRG AVEHAFNALS LLVARQLVYD LERWSEQAQI AVVPPLCPLD ISPYDYTRCG ELIERAAEAT VAWLRADGLS SRRVPGALEP HTHDEASPSC STDLLGPTSG HAHAKQHGHG HPH
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