| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4895 |
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| Symbol | ygfH |
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| ID | 4041757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1559288 |
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| End bp | 1560820 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637980316 |
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| Product | propionyl-CoA:succinate-CoA transferase |
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| Protein accession | YP_587026 |
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| Protein GI | 94313817 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0427] Acetyl-CoA hydrolase |
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| TIGRFAM ID | [TIGR03458] succinate CoA transferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.101367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCGCG ATCGCATTCG CCTGGCAGAC CTGCAGAACA GGATCATGTC GGCCGATCAA
GCTGCAGCAC TGATTCAGGA TGGCATGACG GTAGGGATGA GCGGGTTCAC CCGCGCAGGC
GACTGCAAGG CCGTACCGGT GGCGCTGGCG CGCCGCGCTG CCACCGATCC GCTGCAGATC
ACGCTGATCA CGGGCGCATC TCTCGGTAAC GACACCGACA AGATCCTGGC GGAGAGCAAT
GTGCTTGCCC GCCGCCTGCC TTTCCAGTCC GACTCCACGC TGCGCCGCAA GATCAACGAC
GGCGAGGTGA TGTTTATCGA CCAGCATCTG GGTGAAACCG TCGAGCAACT GCGCAGCGGC
CAGATCGCAC CCGTCGATAT CGCGGTTATC GAAGCCACGG CTATCACCGA GACGGGTGGC
ATCGTGCCCA CCACGTCGGT CGGCAACTCC GCCAGCTTCG CGATGATGGC GAAGAAGGTG
ATCGTCGAAC TGAACCTGAA CATGCCGACC GGGCTGGAGG GACTGCATGA CATCGCGTTC
CCGGTACAAC GCCCATATCG CCAGCCGATT CCATTGATCG CCGTCGAGCA ACGCATCGGC
CTGCCGTACA TCCCCGTCGA TCCGTCGCGC ATCGCCGCGA TCGTGATCAC CCAGCGCGAC
GACAGCCCAT CGAACGCGCT GCCGCCCGAT GGCGAAACGC GCCAGATCGC CGGACACCTG
AATGCGCTGC TCGATCGTGA AGTGCGCGCC GGACGGCTCT CGACGTCGCT GCAGCCGCTG
CAGGCCGGTA TTGGCACGAT CGCCAACGCC GTGCTGCACG GGCTGGCCGA CTCGCCGTTC
CACGACCTGA CCATGTATTC GGAAGTCCTG CAGGACAGCA CCATTGCGCT GATCGACGCG
GGCAAGCTGC GCTTCGCCTC GGCATCGTCG ATGACGCTGT CGGCACCCGT GTATCGTCGC
GTGCTCGATG ATATCGAGCG CTACAAATCG CGTCTGATCC TGCGCCCGCA AGAGATCAGC
AATCACCCCG AAGTGCTGCG CCGCCTGGGC CTGATCACGA TCAATACCGC GCTCGAGTGC
GACATCTATG GCAACGTGAA CTCGACGCAC GTTGGCGGCA CGCACATGAT GAACGGTATC
GGCGGCTCGG GCGATTTCGC GCGCAATGCG TACCTGTCGG TGTTCGTCAC CAAATCGGTG
GCCAAGGACG GCAAGATCTC CAGCATCGTG CCGATGGTCT CGCACGTCGA CAACAGCGAG
CACGACGTCG ATATCCTCGT CACGGAACAC GGGCTGGCCG ACCTGCGCGG ACTGGCACCG
CGCGAGCGAG CGCTGCAGGT CATCAACAAC TGCGCCGACC CCGCCTACCG CGACGGGCTG
CTCGACTACT TCCGCCGCGC CTGCCTCCGT GGAGGCCAGA CGCCTCATCT GCTCGAGGAA
GCGTTCGCCT GGCATATCAA CTACCGCGAA CAAGGCACGA TGCAGCCGCA GGGCCACGTT
GGCAAGGCCG CCATCGAAGC GCTGGCAGCC TAA
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| Protein sequence | MYRDRIRLAD LQNRIMSADQ AAALIQDGMT VGMSGFTRAG DCKAVPVALA RRAATDPLQI
TLITGASLGN DTDKILAESN VLARRLPFQS DSTLRRKIND GEVMFIDQHL GETVEQLRSG
QIAPVDIAVI EATAITETGG IVPTTSVGNS ASFAMMAKKV IVELNLNMPT GLEGLHDIAF
PVQRPYRQPI PLIAVEQRIG LPYIPVDPSR IAAIVITQRD DSPSNALPPD GETRQIAGHL
NALLDREVRA GRLSTSLQPL QAGIGTIANA VLHGLADSPF HDLTMYSEVL QDSTIALIDA
GKLRFASASS MTLSAPVYRR VLDDIERYKS RLILRPQEIS NHPEVLRRLG LITINTALEC
DIYGNVNSTH VGGTHMMNGI GGSGDFARNA YLSVFVTKSV AKDGKISSIV PMVSHVDNSE
HDVDILVTEH GLADLRGLAP RERALQVINN CADPAYRDGL LDYFRRACLR GGQTPHLLEE
AFAWHINYRE QGTMQPQGHV GKAAIEALAA
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