| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4885 |
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| Symbol | benD |
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| ID | 4041747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1547054 |
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| End bp | 1547848 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980306 |
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| Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
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| Protein accession | YP_587016 |
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| Protein GI | 94313807 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0313569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.200549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACAA CGCAACGTTT CGCCGGCCGG ACGATGATCG TCACGGGCGC GGCGCAGGGT
ATCGGTCGCG GCGTGGCAAT GTCCGCGGCT GCCGAGGGCG CGAATGTGGT GCTGGTGGAC
CGCGCCACGC TGGTCGAGGA AGTCGCGGCC GGGATTCTGG CTGCGGGCGG CGCGGCACTG
TCCGTCAATG CTGATCTGGA GACGTATGCG GGGGCGCAGG CGATGGTAGC CACGGCCACC
GCTGCCTTCG GCCATGTCGA TATCCTGATC AACAACGTGG GCGGCACGAT CTGGGCCAAG
CCCTATGAGC ACTACGCTGA AGCCGAGATC GAGGCCGAGA TCCGCCGGTC GCTGTTTCCC
ACGCTCTGGG GTTGCCGCGC GGTGTTGCCG GGCATGGTCG AGCGTCGCGC CGGAGTCATC
GTCAACGTGT CGTCGATTGC GACGCGCGGC ATCCATCGCG TGCCCTACGC GGCGGCCAAA
GGCGGCGTGA ACGCGCTGAC CGCGAGCCTG GCGTTCGAGC ACGCGGCGGA TGGCATTCGC
ATTAACGCGG TGGCTACGGG CGGCACCGAG GCGCCGCCGC GCAGGATCCC GCGCAACACG
CAGCAACAAT CGGAACAGTC GGAACAGGAA TCGAAGTGGT ATCAGGCAAT CGTCGATCAG
ACCGTGTCGT CGAGCCTGAT GCACCGGTAC GGGACGATCG AGGAACAAGT GGGTGTGATC
CTGTTCCTGG CCTCGGACGA GGCGTCGTAC ATGACGGGGA CTGTGGTGCC GGTGGGTGGC
GGAGACCTTG GCTGA
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| Protein sequence | MRTTQRFAGR TMIVTGAAQG IGRGVAMSAA AEGANVVLVD RATLVEEVAA GILAAGGAAL
SVNADLETYA GAQAMVATAT AAFGHVDILI NNVGGTIWAK PYEHYAEAEI EAEIRRSLFP
TLWGCRAVLP GMVERRAGVI VNVSSIATRG IHRVPYAAAK GGVNALTASL AFEHAADGIR
INAVATGGTE APPRRIPRNT QQQSEQSEQE SKWYQAIVDQ TVSSSLMHRY GTIEEQVGVI
LFLASDEASY MTGTVVPVGG GDLG
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