| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4879 |
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| Symbol | catM |
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| ID | 4041741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1541086 |
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| End bp | 1541961 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980300 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_587010 |
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| Protein GI | 94313801 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.735479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCC GCCACCTCCG CTACTTCCAG ACGGTTGCCC AGGAACTCAA CGTGACACGG
GCGGCCGAAA AGCTTCATAT GGCACAGCCG CCACTTTCCC GGCAAATCCG CCAGTTCGAG
GAAGAAGTCG GCGTGGCGTT GTTCGATCGT GTCGGGCGGG GCCTGAGGTT GACCGAGGCG
GGCCGTTTCC TGCTCGAGCA GTCGCTGCAA CTGACCCAGC GACTGGAGGA GACGCTGGAA
AGCACGCGGC GCATCGGCCG CAATGAAAAG CGCTGGTTCG GCATCGGCTT CGTGCCGTCG
GTGCTGTATG GCGTGCTGCC CGAGCTGATC CGCGAACTGC GTGGCGACGA TAGCCAGGTG
GAGGTCGGCC TGACCGAGAT GATCACGGTG CAGCAACTCG AAGCGCTCAA GTCCGGGCGG
ATCGATCTGG CCTTCGGGCG TCTCACGTTC AACGACCCGG CGATCGTCCA GCAGGTGGTG
ATGGCCGAAT CGCTGGTGGC GGCGATCCCG GGCACCGCGC CCACCCCCAC CGCTCCTTTC
GATGCCGACG CGCTGGCCCG ACAGCCGCTG ATCCTCTATC CGGCCCGGCC ACGGCCAAGC
TACGCCGACC ATGTGCTGTC GCTGTTCCGC GGCCAAGGGT TGCAGCCCCG CGTGGTGCAG
GAGGCCAACG AACTGCAGAC CGCGCTCGGC CTCGTCGCCG CCGGGCTAGG CATCACGCTC
GTGCCGTCCT CGGTGCAGCG CCTGCATCGT GATGATGTGC GCTATGTGCC GATCAACGCT
CCGGGCTTCG TCTCACCCGT GATCATGAGC TACCGCTCTG GCGACACCTC GCCATACCTG
GCCCGCGCGG TCGCATGGGT CCTGCAGCAA GCGTAG
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| Protein sequence | MELRHLRYFQ TVAQELNVTR AAEKLHMAQP PLSRQIRQFE EEVGVALFDR VGRGLRLTEA
GRFLLEQSLQ LTQRLEETLE STRRIGRNEK RWFGIGFVPS VLYGVLPELI RELRGDDSQV
EVGLTEMITV QQLEALKSGR IDLAFGRLTF NDPAIVQQVV MAESLVAAIP GTAPTPTAPF
DADALARQPL ILYPARPRPS YADHVLSLFR GQGLQPRVVQ EANELQTALG LVAAGLGITL
VPSSVQRLHR DDVRYVPINA PGFVSPVIMS YRSGDTSPYL ARAVAWVLQQ A
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