Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4870 |
Symbol | |
ID | 4041732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1531863 |
End bp | 1533116 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637980291 |
Product | glutamate carboxypeptidase |
Protein accession | YP_587001 |
Protein GI | 94313792 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.120273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCTTT CCCTTCGCCA CCTTGCCATC GCCGCTGCCG CTGCCGTGGT CTGCAATGCC GCCGTGGCTG CCGGCGCCGA TACCGGGTTG CTCGATGCCG CGCGGTCCGC ACAGCCGGCC GTGGTGCAGT CGCTCAAGGA CATGGTGTCG ATAGAGTCGG GCAGCGCCAA TATCGAAGGG CTCGACCGCA TGGCGGACTA CACGTCGAAG CGGCTCCAGG CGTTGGGTGC CAAGGTGGAG CGTGTGCCGG CAAGCTCGGG CAAGAGCCCG ATCGTCAAGG CGACGCTGAC CGGTACGGGC AAGCACAAGA TCATGTTGAT TGCCCATATG GATACGGTCT ATCCGGCCGG TATCCTCAAG ACGCAGCCGA TCCGCGAGGA CGGCAACCGT CTCTATGGTC CCGGCATCGC CGACGACAAG GGCGGCATCG CCGTGATCCT GCATTCGCTG GAAATCCTCA AGGCGCAGGG ATGGAAGGAC TACGCGCAAC TGACCGTGCT GTTCAACGCC GATGAGGAAG TCGGTTCGGG CGGATCGGGC GAAACGATTG CGGCGCTGGC CGATCAGCAG GACGTGGTGT TGTCCTGCGA GCCGAACGTG GCCAAGTCTG TCGCCAAGTC GGAGTCGCTG CTGCTGGGCG CTGCTGGCAC GGCGACTGCG ACGATGCAGG TCAAGGGCCG CTCGTCGCAC GCCGGCGCGG CGCCGGAGCT GGGCCGCAAT GCGCTGATCG AACTGGCCTA TCAGTTGCAG CAGACGCGTG ACGTGGCCAA GTCGGTGCCT GGCTCTCAAC TGAACTGGAC CATGGCCAAG GGCGGCGACG TAGGCAACCA GATCCCCGAG TTGGCCAGTG CGTATGGCGA TGTGCGTGTC ACGGCCAACG GCGCCGCGCA GAAGCTGCAG ACCGCGCTGC AGGAGAAGGT CAACGCGGGC CACCTGATTC CCGACACGCA GACCACGGTG ACGATGGAAG AGGGCCGCCC CGCCTACGTG GCTGACGCCC GCGCGAAGGA TCTGGCCAAG CGCGCGCAGC AGGTCTACGC GGAACTCGAC GGCCGCTCGC TGCTGCTGAT CCCTGGCACG GGTGGCGGCA CGGACGCCGG CTATGCGGGG CGGTCGGGCA AGGCGGTTGT GCTGGAGAGC TTCGGCCTGT CTGGCTTCGG CTACCACGCT CGCGACGAAT ACGTGGAGCT CGATTCGATC GTGCCCCGTC TGTATCTGAT GACGCGGATG CTGCAGGAGA TCGGAAAGAA CTGA
|
Protein sequence | MLLSLRHLAI AAAAAVVCNA AVAAGADTGL LDAARSAQPA VVQSLKDMVS IESGSANIEG LDRMADYTSK RLQALGAKVE RVPASSGKSP IVKATLTGTG KHKIMLIAHM DTVYPAGILK TQPIREDGNR LYGPGIADDK GGIAVILHSL EILKAQGWKD YAQLTVLFNA DEEVGSGGSG ETIAALADQQ DVVLSCEPNV AKSVAKSESL LLGAAGTATA TMQVKGRSSH AGAAPELGRN ALIELAYQLQ QTRDVAKSVP GSQLNWTMAK GGDVGNQIPE LASAYGDVRV TANGAAQKLQ TALQEKVNAG HLIPDTQTTV TMEEGRPAYV ADARAKDLAK RAQQVYAELD GRSLLLIPGT GGGTDAGYAG RSGKAVVLES FGLSGFGYHA RDEYVELDSI VPRLYLMTRM LQEIGKN
|
| |