| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4866 |
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| Symbol | acrB |
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| ID | 4041728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1524874 |
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| End bp | 1528119 |
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| Gene Length | 3246 bp |
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| Protein Length | 1081 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637980287 |
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| Product | acriflavin resistance protein F |
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| Protein accession | YP_586997 |
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| Protein GI | 94313788 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0385197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCCG CTTGCGAGCG GACCGCCAGG GGGGCTGTTT TCGCCGAGAC CAAGATGAAT
CTCTCGAAAT TCTTTATCGA CCGCCCCATT TTCGCGGGTG TGCTATCGGT GCTGATCTTC
CTGATCGGCG CCATATCGAT GTTCAAGTTG CCGATCTCGG AGTACCCGGA AGTGGTGCCG
CCGTCGGTGG TGGTGCGCGC GCAGTTCCCG GGCGCCAACC CGAAGGTGAT CGCCGAGACC
GTGGCCACGC CGCTGGAAGA GCAGATCAAC GGCGTCGAGG ACATGCTCTA CATGAACTCG
CAGGCCAACA GCGACGGCAC GCTGACGCTG ACGGTGACCT TCAAGCTGGG CACGGACCCG
GACAAGGCCC AGCAGCTCGT GCAGAACCGC GTCTCGCAGG CCGAGCCGCG TCTGCCCGAG
GACGTGCGTC GCCTGGGCAT TACCACGGTC AAGAGCTCGC CTGATCTGAC CATGGTGGTG
CACCTGGTCT CGCCGAACAA TCGCTATGAC ATGACGTATC TGCGCAACTA CGCGCTGATC
AACGTCAAGG ACCGCCTGGC GCGTATCCAG GGCGTCGGTC AGGTGCAGAT GTTCGGCTCG
GGCGACTACT CGATGCGTGT GTGGCTGAAC CCCGACAAGA TCGCCGAGCG TCATCTGGCG
GCCTCGGACG TGGTCAAGGC CATCCGCGAG CAGAACGTGC AGGTGGCAGC CGGCGTGATC
GGACAATCGC CCTCGCTGCC GGGCACCGAT CTGCAACTGT CGGTCAACGC GCAGGGCCGT
CTGCAGACGG TGGAGGAGTT TGGCGACATC ATCGTCAACA CCTCGCCGGA CGGCGCGGTG
ACGTACCTCA AGGACATCGC CCGCGTCGAG CTGGGTGCCT CCGAGTACGC ACTGCGTTCG
CTGCTCGACA ACAAGTCCGC CGTGGCGCTG CCGATCTTCC AGGCGCCGGG TTCCAACGCG
ATCCAGATCT CGGACGATGT GCGCAAGACG ATGGCCGAGC TGAAAGCGAA CATGCCGGAG
GGCGTGGACT ACAGCATCGT CTATGACCCG ACCCAGTTCG TGCGCCACAG CATCGAGGCC
GTGACGCACA CGCTGTTCGA GGCCATCGCG CTGGTGGTGC TGGTGGTGAT CCTGTTCCTG
CAGACCTGGC GCGCGTCGAT CATTCCGCTG CTGGCCGTGC CGGTGTCGAT CGTCGGCACG
TTCGGGCTGA TGCACGCGTT CGGGTTCTCG ATCAACGCGC TGAGCCTGTT CGGTCTGGTG
TTGGCGATCG GTATCGTGGT GGACGATGCG ATCGTGGTAG TGGAGAACGT CGAGCGCAAT
ATCGAGGAAG GGTTGTCGCC GAAGGAAGCC ACGTACAAGG CCATGCGCGA GGTAAGTGGT
CCGATCATCG CCATCGCGCT GACGCTGATC GCCGTGTTCG TGCCGCTGGC ATTCATGACT
GGCCTGACCG GGCAGTTCTA CAAGCAGTTC GCGCTGACGA TCTCGATCTC GACGATCATC
TCGGCGTTCA ACTCGCTGAC GCTGTCGCCC GCGCTGTCCG CGCTGCTGCT CAAGAGCCAC
GACGCGCCGA AGGATTGGCT GACGCGCGCC ATGGACAAGG TGCTCGGCAA GTTCTTCGTC
CGCTTCAACC AGTTCTTCCG CCGCAGCTCG GACAACTATG GCCGGGGCGT GAAGGGCGTG
ATTCGCCGCA AGGGCTCGGT GTTCGGCGTG TACGCGCTGA TGCTGGTCGC GACCTGGGGC
GTGTTCCAGA TGGTGCCGAA GGGCTTCGTA CCGGCGCAGG ACAAGCAGTA CCTGGTGAGC
TTCGCCAAGC TGCCTGACGG CGCGACGCTG GATCGCACGG AAGACGTGAT CCGCCGCATG
TCGGATATCG CGCTCAAGCA TCCGGGCGTG GAGTCGGCGG TGGCATTCCC GGGCCTGTCG
ATCAACGGCT TCACCAATAG CCCGAGCGCC GGCATCGTGT TCGTCACGCT CGATCCGTTC
GACAAGCGCA AGAGCAAGGA ACTGTCTGGC AATGCGATCG CGGCTGATCT GAACAAGCAG
TACGGCTCGA TCCAGGACGC CTTCATTGCG GTGTTCCCGC CGCCGCCGGT GCAGGGCCTC
GGTACGATCG GCGGTTTCAA GATGATGATC GAGGACCGCG CCGCGCTGGG CTATGACGAA
CTGTTTAACG CGACCAACGC GTTCATGGCC AAGGCGCGCG CCACGCCCGA ACTGGCTGGC
ATCTTCAGCA ACTATCAGGT GAACGTGCCG CAGCTAGACG TGAAGCTGGA CCGCACCAAG
GCCAAGCAAC TCGGCGTGCC CGTGACCGAT GTGTTCGACA CGCTCCAGAC CTACCTCGGC
TCTGCGTACG TCAACGACTT CAACAAGTTT GGTCGCACGT ACCAGGTCAA GGTGCAGGCC
GATGCGCAGT TCCGCCAGCA TGCGGAGGAC ATCCTGCAGC TGAAGACGCG CAACGTGAGT
GGTGAGATGG TGCCGCTGTC GTCGCTGGTG CAGGTCAAGC AGAGCTTCGG CCCCGACAGC
GTGATCCGCT ACAACGGCTT CACGGCTGCC GATATGAATG GTGGTCCGGC TCCTGGCTTC
TCGTCGGGCC AGGCGCAGGC CGCCGCCGAG CGGATCGCCG CGGAGACGCT GCCCAAGGGT
ATCGCCTTCG AGTGGACCGA GCTGACGTAT CAGGACATCC TGGCCGGCAA TGCGGGCGTC
TGGATCTTCC CGCTGTGCGT GTTGCTGGTG TTCCTGGTGC TGGCCGCCCA GTACGAAAGC
CTGACGCTGC CGCTGGCGGT GATCCTGATC GTGCCGCTGA GCCTGCTGGC CGCCATGACT
GGCGTGTGGC TGACCCGTGG CGATAACAAC ATCTTCACGC AGATCGGTTT CATCGTGCTG
GTGGGGTTAT CCGCGAAGAA CGCGATTCTG ATCGTCGAGT TCGCGCGTGA ACTGGAACAT
CACGGCCGTA CGGTGGTGCA GGCCGCGATC GAGGCCAGCC GCCTGCGTCT GCGCCCGATC
CTGATGACGT CGTTCGCTTT CATCATGGGT GTGGTGCCGC TGGTGGTGTC CACCGGCGCC
GGCGCGGAAA TGCGCCATGC GATGGGCGTG GCCGTGTTCG CGGGGATGCT GGGGGTGACG
TTCTTCGGCC TGTTCCTGAC GCCGGTCTTC TATGTGGCGC TGCGTTTGCT GGCCACGCGA
GGCCAGCGCC AGAAGGTGGC TGAGCAGCCT GCGTCGGCGT CGCAGGCGGT GGCATCGGCA
GAATAA
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| Protein sequence | MASACERTAR GAVFAETKMN LSKFFIDRPI FAGVLSVLIF LIGAISMFKL PISEYPEVVP
PSVVVRAQFP GANPKVIAET VATPLEEQIN GVEDMLYMNS QANSDGTLTL TVTFKLGTDP
DKAQQLVQNR VSQAEPRLPE DVRRLGITTV KSSPDLTMVV HLVSPNNRYD MTYLRNYALI
NVKDRLARIQ GVGQVQMFGS GDYSMRVWLN PDKIAERHLA ASDVVKAIRE QNVQVAAGVI
GQSPSLPGTD LQLSVNAQGR LQTVEEFGDI IVNTSPDGAV TYLKDIARVE LGASEYALRS
LLDNKSAVAL PIFQAPGSNA IQISDDVRKT MAELKANMPE GVDYSIVYDP TQFVRHSIEA
VTHTLFEAIA LVVLVVILFL QTWRASIIPL LAVPVSIVGT FGLMHAFGFS INALSLFGLV
LAIGIVVDDA IVVVENVERN IEEGLSPKEA TYKAMREVSG PIIAIALTLI AVFVPLAFMT
GLTGQFYKQF ALTISISTII SAFNSLTLSP ALSALLLKSH DAPKDWLTRA MDKVLGKFFV
RFNQFFRRSS DNYGRGVKGV IRRKGSVFGV YALMLVATWG VFQMVPKGFV PAQDKQYLVS
FAKLPDGATL DRTEDVIRRM SDIALKHPGV ESAVAFPGLS INGFTNSPSA GIVFVTLDPF
DKRKSKELSG NAIAADLNKQ YGSIQDAFIA VFPPPPVQGL GTIGGFKMMI EDRAALGYDE
LFNATNAFMA KARATPELAG IFSNYQVNVP QLDVKLDRTK AKQLGVPVTD VFDTLQTYLG
SAYVNDFNKF GRTYQVKVQA DAQFRQHAED ILQLKTRNVS GEMVPLSSLV QVKQSFGPDS
VIRYNGFTAA DMNGGPAPGF SSGQAQAAAE RIAAETLPKG IAFEWTELTY QDILAGNAGV
WIFPLCVLLV FLVLAAQYES LTLPLAVILI VPLSLLAAMT GVWLTRGDNN IFTQIGFIVL
VGLSAKNAIL IVEFARELEH HGRTVVQAAI EASRLRLRPI LMTSFAFIMG VVPLVVSTGA
GAEMRHAMGV AVFAGMLGVT FFGLFLTPVF YVALRLLATR GQRQKVAEQP ASASQAVASA
E
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