| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4865 |
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| Symbol | nodT |
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| ID | 4041727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1523381 |
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| End bp | 1524862 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637980286 |
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| Product | RND cation/multidrug efflux system outer membrane protein, NodT |
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| Protein accession | YP_586996 |
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| Protein GI | 94313787 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000716421 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.820676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACG CAATGAAGCT GGTCCTGCCG AAGCTGGGTA TGCTGGCCGC CGCGCTGGTG
CTGGCGGGCT GCTCGCTGGC GCCGACTTAC AAGGTGCCCG AGACGCCCAC CGCGTCGACG
TTCAAGGAAG CCGAGGCCGC TGCTGCGGAA GGCGCGCAAT GGAAGACCGC GACGCCGGCC
GAAGGCCAGC ATCGCGGTGA ATGGTGGAAG GTCTTCGGCG ACGCCGATCT CGATCGTCTG
ATCGACGCGG CCAACGCCTA CAACCAGGAC CTCGCTGCCG CCGCGGCGCG TCTGAAGCAG
GCACGTGCCT TCACGGGCGC GACCGAGGCG GACCTGTATC CGCAATTGAG CGCGGGGTTC
AGCCCGACGC GCGCGCAGCC CTCGGCAGCC TCGCAAGGCT TGCCCGATGG CACGCGGGTG
TCGCCGCAGA CCGTGTACCA GGCGCGTCTG ATCGCCAACT ACGAGCTTGA TCTCTTCGGC
CGCGTGGCCA ATAGCGTCAA TGCAGCACGC GCCGACGAGC AGGGCGCCGA AGACCTGTAT
CGTTCGGTGC AGCTCGCGCT GCAGGCCGAT ACGGCGCAGG CGTACTTCGC GCTGCGCACG
CTTGATAGCG ACCGCGATCT GCTCAACGCG ACGATCAAGC TGCGCGAGGA CGCGCTGACG
CTGCTGCGCA AGCGCTACGA GGCTGGCGAA ACCACCGATC TCGATCCGGC CCGCGCCGAG
GCCGAGCTTG GCACCGCCCG CGCCGATCTG GCTGGCATCG AGCGGCGCCG TGCCAACCAG
GAGCACGCGC TGGCCGTACT GACCGGGGTG TCGCCGTCGC AGTTCGCGCT GGCGGCGCGA
CCGTTTGACA CGCCGCCGGT TGCGGTTCCC GCCGGCTTGC CGTCGGAACT GCTCGAACGT
CGCCCCGATA TCGCTGCGGC GGAACGCCAG ATGGCGGCCG CCAACGCACG GATCGGTGTG
GCAAAGGCGG CGTTCTTCCC ACGCATCTCG CTGACAGCGC TGTTCGGCTT CGAGTCGTCG
GATATCTCGA ACCTGTTCAA GTGGTCGTCG CGCGCATGGT TGCTTGGGCC GCTGGTGGGT
TCCACTGTTG CCCAGACCGT GTTTGACGGT GGCCGCAACA GTTCGAACCT GGCCGGCGCG
CGCGCGGCGC ACGAGGAAAG CGTGGCGCGA TATCGCCAGA CCGTGCTGGT GGCGTTCCGC
GAGGTCGAGG ACAGTCTGGC CGACGTACGC TGGTTTAGCC AGCAGGGCGC GGCGCTCGAC
AGTGCATTGG CCGGCGCGAA GCGCGCGCAG CGCACTTCGC GCAGCCGCTA TGACGCGGGC
GCGGTGGACT ACCTCACCGT GATCGATGCG GACCGTACGG TGCTGCAATC GCAACGCGAT
GCCAATGCGG TGGCCGGGCT GCGGGCGGCG GCAACGGTGT CGCTCGTGCG TAGCCTTGGT
GGCGGTTGGG GCCCTCTGCC GGAGAATGTG GCGAAGAACT GA
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| Protein sequence | MNNAMKLVLP KLGMLAAALV LAGCSLAPTY KVPETPTAST FKEAEAAAAE GAQWKTATPA
EGQHRGEWWK VFGDADLDRL IDAANAYNQD LAAAAARLKQ ARAFTGATEA DLYPQLSAGF
SPTRAQPSAA SQGLPDGTRV SPQTVYQARL IANYELDLFG RVANSVNAAR ADEQGAEDLY
RSVQLALQAD TAQAYFALRT LDSDRDLLNA TIKLREDALT LLRKRYEAGE TTDLDPARAE
AELGTARADL AGIERRRANQ EHALAVLTGV SPSQFALAAR PFDTPPVAVP AGLPSELLER
RPDIAAAERQ MAAANARIGV AKAAFFPRIS LTALFGFESS DISNLFKWSS RAWLLGPLVG
STVAQTVFDG GRNSSNLAGA RAAHEESVAR YRQTVLVAFR EVEDSLADVR WFSQQGAALD
SALAGAKRAQ RTSRSRYDAG AVDYLTVIDA DRTVLQSQRD ANAVAGLRAA ATVSLVRSLG
GGWGPLPENV AKN
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