| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4861 |
|---|
| Symbol | |
|---|
| ID | 4041723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1521266 |
|---|
| End bp | 1521898 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637980282 |
|---|
| Product | putative CDP-alcohol phosphatidyltransferase |
|---|
| Protein accession | YP_586992 |
|---|
| Protein GI | 94313783 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1183] Phosphatidylserine synthase |
|---|
| TIGRFAM ID | [TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.000423361 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.308527 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACGC CTCAACCGCG CCCCCGGCAT TTCTCGATGC TGCGCGATCT GCAACTGGCC
GATTTCTTCA CGCTGGCCAA CGCGGCGTGC GGCATGGGTT CGGTGTTCTT CGCCATGTTC
TTCGTGGCGG AGCCTTCGCT CAGGACCTTC TATATCGCCG CGGCGCTGGC GCCCGCCGCG
TTCATCTTCG ATGTGCTCGA CGGACGCATT GCCCGCTGGC GCCACGCGCA TTCCGCGCTT
GGCCGCGAGC TCGACTCGCT CTCCGACATC ATCTCGTTCG GCGTCGGCCC GGCCACGCTG
GCGTTTGCGG CCGGCATGCG CGGCGGTTGG GATCTGGCGG CGCTGATCTA CTTCGTCTGC
TGCGGTGTGA GCCGCCTTGC CCGATTCAAT GTCACTGCCG AGTCGATGGC CGAGGGTACC
GGCAAAGTCA AATACTTCGA GGGCACACCG ATTCCGACCA GCGTTGTGCT GACCGGTGTG
CTGGCCTGGT GCGCGTCCCA GGGCCGGATC GGCGATGCGC TGGTCGGCGG CGCGTGGGAG
ATTGGTCCCG GCACGCTGCA TCCGATGGCG TTGCTATTCG TGCTGTCGGG CTCGCTGATG
ATCTCGAAGA CCCTCCGCAT TCCCAAGTTC TGA
|
|---|
| Protein sequence | MSTPQPRPRH FSMLRDLQLA DFFTLANAAC GMGSVFFAMF FVAEPSLRTF YIAAALAPAA
FIFDVLDGRI ARWRHAHSAL GRELDSLSDI ISFGVGPATL AFAAGMRGGW DLAALIYFVC
CGVSRLARFN VTAESMAEGT GKVKYFEGTP IPTSVVLTGV LAWCASQGRI GDALVGGAWE
IGPGTLHPMA LLFVLSGSLM ISKTLRIPKF
|
|---|
| |