Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4853 |
Symbol | bugT |
ID | 4041715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1511166 |
End bp | 1512110 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637980274 |
Product | extra-cytoplasmic solute receptor |
Protein accession | YP_586984 |
Protein GI | 94313775 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0565268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.206495 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGAACGG CCTTCGCCAT GCTGCCCGCC GTTGGGTCCG CGCAGACGTT TCCACAACAT CCGGTGCGTA TGGTCTTGCC CTACCCCGCC GGCGGACCGA CCGACCTGCT CGCGCGGGTG GTCGCGGTCA AGATGGGCGA GAGCATGGGC CAGAGCGTCG TCGTCGACAA CAAGCCGGGG GCCAGCGGCA TGATCGGCGC GGAAGCGGTC GCACGCGCCA CGCCCGATGG CTACACGATC CTGGCCAATG CCTCGCTGCA CGTGATCAAC CCGAGCATCT ACTCCAAGAT GCGCTACGAC GCGTTCAAGG ACTTCGTTCC GATCACGCAA CTGGCCGAGG TGCCGCTTGT ACTGGTGGTC AACAACGATT CGCCGGTCAG GACCGTGCAG GACCTGATCG CGTACGCCAA GCGCCAGGGT GGCGCGCTCA ACTTCGGCTC GGCCGGTAAT GCATCGGCAC AGCAACTGGC TGGCGAATCA TTCAAGCTGG CGGCCAAGGT GCCGATGCAG CATGTGCCGT ACAAAGGCAG CGCGCCGGCA TTGACCGACC TGATGGGCGG GCAGATCCAG CTGATGTTCG ATTCGATGCC GTCGGCCATG CCGTTTATCA AGTCGGGCAA GCTGCGTGCC GTGGCGGTGA CCACCGCGCA CCGCGCCAGC GCCCTGCCAG ACGTGCCCAC CGTCGCCGAA TCGGGCCTGC CGGGCTTCGA CATCAGCACG TGGTATGGCC TGTGGGCGCC GCGCGGCACG CCGGCTCCGA TCGTCGAAAA GCTGGCGGCG AATGCCGCTG CCGCGCTGAA GCGCCCTGAC GTGCGCCAGC AGTACGCCGA CATGGGCGCC GAACCCGTCG GGTCCTCGCC GGCGGATTTC GCGCGGTACA ACGTCTCCGA GGGCAAGAAG TGGGCGGAGA TCGTGCATCG CTCCGGCGCG AAGGCCGACG AATGA
|
Protein sequence | MGTAFAMLPA VGSAQTFPQH PVRMVLPYPA GGPTDLLARV VAVKMGESMG QSVVVDNKPG ASGMIGAEAV ARATPDGYTI LANASLHVIN PSIYSKMRYD AFKDFVPITQ LAEVPLVLVV NNDSPVRTVQ DLIAYAKRQG GALNFGSAGN ASAQQLAGES FKLAAKVPMQ HVPYKGSAPA LTDLMGGQIQ LMFDSMPSAM PFIKSGKLRA VAVTTAHRAS ALPDVPTVAE SGLPGFDIST WYGLWAPRGT PAPIVEKLAA NAAAALKRPD VRQQYADMGA EPVGSSPADF ARYNVSEGKK WAEIVHRSGA KADE
|
| |