| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4852 |
|---|
| Symbol | |
|---|
| ID | 4041714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 1510099 |
|---|
| End bp | 1511109 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637980273 |
|---|
| Product | putative Zinc-dependent dehydrogenase |
|---|
| Protein accession | YP_586983 |
|---|
| Protein GI | 94313774 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.249579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.200549 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCGC TCGTATGCAA GCAGTTCGGC GGCGTCGAGG ATGTGGAACT CGCGACCGTG
TCCGAACCCG CCCTGGCCGA CCCCCATGCG GTCACGATCG AAGTGGAGTT CGCCAGCGTC
AGCCATGCCA CCGGCCTGAT GATCGCTGGC CAGTATCAGC GCCGCCCGCC GCTGCCATTC
GTGCCCGGCA CGGAAGCGGT GGGACGCGTG GTGGCCTGCG GCAAGGCCGT CACACGGCTG
CGCCCAGGTG ACCGGGTCGT AGCCATTGCC GACTGGGGCT GCTACGCGGA GCGATTCACG
GTACCTGAGT ACACCGTCTA CCCTGTCCCC GACTCGCTGC CGCCGAAGGT CGCGCTGCCG
ATCCCGCTCT CGTACGGCAC CGCCTATTGC GGCCTGGTCT GGCGTTGCGC GCTGACGCCG
CAGGACACCC TGCTGGTGCT CGGCGCTGGC GCTGGCGTCG GACTCGCGGC GGTGGAGATC
GGGCGGCAAC TTGGGGCGAC CGTGGTTGCC TGCGCCAGCA CCGAGGCAAA ACGCGCCGAC
GCGCTGCGCC GCGGGGCCAC GCACGCGGTT GCGCCCCAGG ACCTCGCCGC TCAAGTCAAG
GCACTTACCG GTGGCCGTGG CGCGGATGTG GTGGTGGACC CGGTCGGCGG CGACCTGTTC
GGCCAGGCGC TGCGCGCCGC AGCGCCGAAC GCGCGCATTC TTAGCATCGG CTTTGCCAGC
GGGTCCATCC CGCAGGCGCC GGTCAATCTG CTACTGGTCA AGAACCTGAC GCTGCACGGC
TTCTTCTTCG GCCGATACAT CGGCTGGACG CCGTCCGACG AGCGCGCCGA GCACGCCCCG
GCGTTGCAGC AGGTCATGTC CACCCTGTTT CAGTGGGCTG CGGAAGGGAA GCTGGAGCCG
ACCGTGTCCG CTGTCTATCC GATCACCGGC CTGGGGGATG CCCTCGCCGC GCTGGAATCC
CGCAAGGTTG TTGGCAAGGT GGCAATAAAA ATCAAGGAGA CAGAGACATG A
|
|---|
| Protein sequence | MKALVCKQFG GVEDVELATV SEPALADPHA VTIEVEFASV SHATGLMIAG QYQRRPPLPF
VPGTEAVGRV VACGKAVTRL RPGDRVVAIA DWGCYAERFT VPEYTVYPVP DSLPPKVALP
IPLSYGTAYC GLVWRCALTP QDTLLVLGAG AGVGLAAVEI GRQLGATVVA CASTEAKRAD
ALRRGATHAV APQDLAAQVK ALTGGRGADV VVDPVGGDLF GQALRAAAPN ARILSIGFAS
GSIPQAPVNL LLVKNLTLHG FFFGRYIGWT PSDERAEHAP ALQQVMSTLF QWAAEGKLEP
TVSAVYPITG LGDALAALES RKVVGKVAIK IKETET
|
|---|
| |