| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4846 |
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| Symbol | |
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| ID | 4041708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1503246 |
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| End bp | 1504301 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637980267 |
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| Product | putative TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| Protein accession | YP_586977 |
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| Protein GI | 94313768 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.512512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.113885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCTC TTCGCCATCG TCTTGCCCTG GCCACGCTGA CGCTTGCCAC TGCCACCGGC
TACACAGCCT CCGCCCTAGT CGCACTCATC GCACCCTTCG CACCCAACGC ACACGCGCAG
CCCGCGCCCG TCGTCTGGCA GATGGCGACC GAGTACCCGG CCACGTCGAT GCCCGGCGAA
GGACTGACCA CGTTTGCCCA GGAAGTCGCT ACCCGCACGC AGGGCACATT GGCGCCGCAG
CCGACCTTCG ACGCCAGCGC GGGCGTCAAG TCCGCCCAGA TGCCGGCCGC CATCCGCGAC
GGCAAACTGC AGGCCGGCGA TGCTTTCGGC GGCGCGTTGG GCGAGGTCGA TCCGATTTTC
CTGCTGTCGT CGCTGCCATT CGTAGCGACG TCGGTGGACA AGGCCCATCG CCTGGCCGAT
CTGGCCCGCG CGGACTACGC GCAGGCATTC GAGAAGCAGG GCCAGCACCT GCTCTACATC
ACACCCTGGC CGCCAACGGG CCTCTGGACA CACAAACCCG TGGGCACGCT CGACGATCTG
CGCACGCTGT CCGTGCGCGC CTATGACGAA ACGTCCGCCG ACGTCATGCG CGCTGCGGGA
GCGAAGGCGC AGAACCTGTC GTTCGCCGAT GCCATGCCGC GTCTGAAGGA TGGCTCGGTC
AATGCCGTGC TTTCGTCGGG CGATGGCGGC GCGGGCCGCA AGCTCTGGGA CTACCTGCCC
TACTTCACGG CCATCGGCTA CGCCATGCCG TTGTCGTTTA CGACCGTCAA CGCAGCCGCC
TGGCAATCCC TGACACCCGC CCAGCGAGAC GCCGTGACCG CCGCCGCCAG AGCGACCGAA
GGCAAACAAT GGTCGCGGCT GAATACCCGC CTGACCGAGA ACACCGCCCG AATGCGCGCC
AACGGTGTGA CCATCGACGA CAATCCAGCG CCCGCCGTGC AACAGGCCCT GCAAGCCGCC
GGGCTGAGCG CGGTCGGCGT CTGGCAGACA CGCGTGGGCG AGCGCGGAGC CGCCTTGCTG
AAGACCTATT TCAGCGCGGA GGCAGGGCTC CACTGA
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| Protein sequence | MHPLRHRLAL ATLTLATATG YTASALVALI APFAPNAHAQ PAPVVWQMAT EYPATSMPGE
GLTTFAQEVA TRTQGTLAPQ PTFDASAGVK SAQMPAAIRD GKLQAGDAFG GALGEVDPIF
LLSSLPFVAT SVDKAHRLAD LARADYAQAF EKQGQHLLYI TPWPPTGLWT HKPVGTLDDL
RTLSVRAYDE TSADVMRAAG AKAQNLSFAD AMPRLKDGSV NAVLSSGDGG AGRKLWDYLP
YFTAIGYAMP LSFTTVNAAA WQSLTPAQRD AVTAAARATE GKQWSRLNTR LTENTARMRA
NGVTIDDNPA PAVQQALQAA GLSAVGVWQT RVGERGAALL KTYFSAEAGL H
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