Gene Rmet_4843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4843 
Symbol 
ID4041705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1500252 
End bp1501310 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content67% 
IMG OID637980264 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_586974 
Protein GI94313765 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.699687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.061822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAGC CCACCGCAAT CCGCCTGCGC CACTGCGCCA AGACCTTTGC CGATGGGACG 
ACCGCCCTGC AGCCGCTCGA CCTCGATATC GGCGCGGGGG AAACCGTGGT GCTGCTCGGC
CCGTCGGGTT GCGGCAAGAC CACCACGCTA CGCATCATCG CCGGTCTGGA GCAACCCGAT
GCCGGGGGCG AAGTCTGGTT CGGGGACACC GCCGTCACCG ACCAGCCAAT CGAACAGCGC
GGCGTCGGCA TGGTGTTCCA GAACTACGCG CTGTTCCCGA ACATGACCGT GGCCGAGAAC
ATCGCATACG GCCTGCGGGT GCGTCGTACT GATTCGGCCA CGCGCAAGCG CCGCGTCAAT
GACATGCTGG CGATGATGCA CCTGGAGCCA TTCGCTGACC GGCGCGTCGA CCAGCTCTCC
GGCGGCCAGC GCCAGCGCGT GGCGCTGGCA CGCGCCATCG CCGTACAGCC CCGCGTGCTG
CTGCTGGATG AGCCGCTGAC CGCGCTCGAC GCGAAGCTGC GTGACGCGCT GCGCGCCGAC
ATCAACCAGC TTTTACGCAG CCTGCACATC ACGGCCGTCT ATGTGACGCA TGATCAGGCC
GAAGCCATGG CGCTGGGCGA CCGCATCATC GTGATGGACA AGGGCCGCAT TGCGCAGGCC
GGCACGCCGC AGGAGATCTA CCGCTCGCCC GCGAATGCCT TCGTGGCCGA CTTCATCGGC
ACGATGAACC ATCTGCCCGC CGTGGCCGAA GCCAGACGCT GGCGCGTGCC GGGCGGTACG
GTGCCGATGG CCGCCCCGAA CGATGCCCCG GTCTCAGCGC AGGCACGCCT GATGTTCCGC
CCCGAGGACG TGGCGCTGGT TCAGGCCGAT CAAGCCCATG TGGAAGGCAC CGTCGTCACC
GCGCTCTTTC TTGGCAACCA CACCCGCCTG CTGGTGGACG TGGGGACCAG CCAGCCGATG
GTTGTCGAAA CCGCCCGCCG CGATGCATGG CAGGCCGGTG AACGTGTCGG CCTGCGGATC
GACACGGATC ATCTGATCAC GCTTCACGAA GCGGCATGA
 
Protein sequence
MHEPTAIRLR HCAKTFADGT TALQPLDLDI GAGETVVLLG PSGCGKTTTL RIIAGLEQPD 
AGGEVWFGDT AVTDQPIEQR GVGMVFQNYA LFPNMTVAEN IAYGLRVRRT DSATRKRRVN
DMLAMMHLEP FADRRVDQLS GGQRQRVALA RAIAVQPRVL LLDEPLTALD AKLRDALRAD
INQLLRSLHI TAVYVTHDQA EAMALGDRII VMDKGRIAQA GTPQEIYRSP ANAFVADFIG
TMNHLPAVAE ARRWRVPGGT VPMAAPNDAP VSAQARLMFR PEDVALVQAD QAHVEGTVVT
ALFLGNHTRL LVDVGTSQPM VVETARRDAW QAGERVGLRI DTDHLITLHE AA