Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4843 |
Symbol | |
ID | 4041705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1500252 |
End bp | 1501310 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637980264 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_586974 |
Protein GI | 94313765 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.699687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.061822 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGAGC CCACCGCAAT CCGCCTGCGC CACTGCGCCA AGACCTTTGC CGATGGGACG ACCGCCCTGC AGCCGCTCGA CCTCGATATC GGCGCGGGGG AAACCGTGGT GCTGCTCGGC CCGTCGGGTT GCGGCAAGAC CACCACGCTA CGCATCATCG CCGGTCTGGA GCAACCCGAT GCCGGGGGCG AAGTCTGGTT CGGGGACACC GCCGTCACCG ACCAGCCAAT CGAACAGCGC GGCGTCGGCA TGGTGTTCCA GAACTACGCG CTGTTCCCGA ACATGACCGT GGCCGAGAAC ATCGCATACG GCCTGCGGGT GCGTCGTACT GATTCGGCCA CGCGCAAGCG CCGCGTCAAT GACATGCTGG CGATGATGCA CCTGGAGCCA TTCGCTGACC GGCGCGTCGA CCAGCTCTCC GGCGGCCAGC GCCAGCGCGT GGCGCTGGCA CGCGCCATCG CCGTACAGCC CCGCGTGCTG CTGCTGGATG AGCCGCTGAC CGCGCTCGAC GCGAAGCTGC GTGACGCGCT GCGCGCCGAC ATCAACCAGC TTTTACGCAG CCTGCACATC ACGGCCGTCT ATGTGACGCA TGATCAGGCC GAAGCCATGG CGCTGGGCGA CCGCATCATC GTGATGGACA AGGGCCGCAT TGCGCAGGCC GGCACGCCGC AGGAGATCTA CCGCTCGCCC GCGAATGCCT TCGTGGCCGA CTTCATCGGC ACGATGAACC ATCTGCCCGC CGTGGCCGAA GCCAGACGCT GGCGCGTGCC GGGCGGTACG GTGCCGATGG CCGCCCCGAA CGATGCCCCG GTCTCAGCGC AGGCACGCCT GATGTTCCGC CCCGAGGACG TGGCGCTGGT TCAGGCCGAT CAAGCCCATG TGGAAGGCAC CGTCGTCACC GCGCTCTTTC TTGGCAACCA CACCCGCCTG CTGGTGGACG TGGGGACCAG CCAGCCGATG GTTGTCGAAA CCGCCCGCCG CGATGCATGG CAGGCCGGTG AACGTGTCGG CCTGCGGATC GACACGGATC ATCTGATCAC GCTTCACGAA GCGGCATGA
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Protein sequence | MHEPTAIRLR HCAKTFADGT TALQPLDLDI GAGETVVLLG PSGCGKTTTL RIIAGLEQPD AGGEVWFGDT AVTDQPIEQR GVGMVFQNYA LFPNMTVAEN IAYGLRVRRT DSATRKRRVN DMLAMMHLEP FADRRVDQLS GGQRQRVALA RAIAVQPRVL LLDEPLTALD AKLRDALRAD INQLLRSLHI TAVYVTHDQA EAMALGDRII VMDKGRIAQA GTPQEIYRSP ANAFVADFIG TMNHLPAVAE ARRWRVPGGT VPMAAPNDAP VSAQARLMFR PEDVALVQAD QAHVEGTVVT ALFLGNHTRL LVDVGTSQPM VVETARRDAW QAGERVGLRI DTDHLITLHE AA
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