| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4840 |
|---|
| Symbol | |
|---|
| ID | 4041702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 1497386 |
|---|
| End bp | 1498408 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637980261 |
|---|
| Product | putative ABC transporter periplasmic binding component |
|---|
| Protein accession | YP_586971 |
|---|
| Protein GI | 94313762 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0305994 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACGC AATCCTTCTG GCGCCGTCCG CTGCGCTGGC TGGCCATCAC CGCAACCGCC
GCGGCCTTCA GCCAGGGCGT GGCCGCGCAA ACCGCCATCT GCTACAACTG CCCGCCCGAA
TGGGCCGACT GGGCCGCGCA GATCCGCGCG ATCAAGGAAA AGACCGGCAT CACCGTGCCA
CTCGACAACA AGAACTCCGG CCAGTCGCTG GCGCAGCTGG TTGCCGAGCG CGCCAGCCCG
GTGGCCGACG TGACCTACTT GGGCGTGACG TTCGGCATCC AGGCCAAGGC CGATGGCGTG
ACGCAAGGGT ACAAGCCGGC CAACTGGAAC GACATTCCCG ACGGTCTCAA GGACCCGCAG
GGCAACTGGT TCGCGATCCA CTCCGGCACG CTCGGTTTCA TGGTTAACGT CGACGCACTG
CGTGGCAAGC CCGTGCCGCA GTCATGGGCC GACTTGCTCA AGCCGGAATA CAAGGGCCTG
ATCGGCTACC TCGACCCGGC CAGCGCCTTC GTCGGCTATG TGGGCGCCGT GGCGGTGAAT
CAGGCAATGG GTGGCACGCT GGACAACTTT GGCCCGGCCT TCAAGTACTT CCGCGAGTTG
CAGAAGAACC AGCCGATCGT GCCGAAGCAG ACCGCCTATG CGCGCGTGCT GTCTGGCGAG
ATTCCCATCC TGCTCGACTA TGACTTCAAC GCCTATCGCG CCAAGTACAA GGATCACGCC
AACGTGGCGT TCGTGATTCC GAAGGAAGGC ACGCTGGTGG TGCCCTACGT GATGAGCCTG
GTCAACAACG CGCCCCATGC CACCGAAGGC CGCAAGGTGC TTGATTTCGT GCTGTCCGAC
CAGGGCCAGG CGCTGTGGGC CAACGCCTAC CTTCGCCCGG TGCGTAACGT GCCGATGCCG
AAGGACGTGC AGTCGCGCTT CCTGCCCGCC GCCGAGTACG CTCGCGCCAA GCCGGTCGAC
TTCGGCAAGA TGGCTCAGGT GCAGAAAGCC TTCAGCGAGC AGTACCTGAA GGAAGTCCGC
TGA
|
|---|
| Protein sequence | MSTQSFWRRP LRWLAITATA AAFSQGVAAQ TAICYNCPPE WADWAAQIRA IKEKTGITVP
LDNKNSGQSL AQLVAERASP VADVTYLGVT FGIQAKADGV TQGYKPANWN DIPDGLKDPQ
GNWFAIHSGT LGFMVNVDAL RGKPVPQSWA DLLKPEYKGL IGYLDPASAF VGYVGAVAVN
QAMGGTLDNF GPAFKYFREL QKNQPIVPKQ TAYARVLSGE IPILLDYDFN AYRAKYKDHA
NVAFVIPKEG TLVVPYVMSL VNNAPHATEG RKVLDFVLSD QGQALWANAY LRPVRNVPMP
KDVQSRFLPA AEYARAKPVD FGKMAQVQKA FSEQYLKEVR
|
|---|
| |