Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4838 |
Symbol | |
ID | 4041700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1494371 |
End bp | 1495951 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637980259 |
Product | hypothetical protein |
Protein accession | YP_586969 |
Protein GI | 94313760 |
COG category | [S] Function unknown |
COG ID | [COG5267] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0664961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTAACC CCAAATCGAG CGCACGGAAG TGGCAGCGCC TGCTGGCGCT GCTGGCCACG GCAACGTTCC TGGCGGCCTG CGCCCAGACG CCGCCATCGG GGGCGACGCA GCCCGGCAGC CTGTCGTCGG CCGACCTGCG CTGGCTGAAC ACGGTCAGCT TCGGCGCTGA CCAGGCCAGC GTGCAGCGCC TCCAGACGAT CGGACGCGAG CGTTATCTGG AAGAGCAGTT GCACACGCCG CTGGCAGACC CGCAACCGGT GGCGGCGGCA ATCGCGGCGC TGCCCGTCAG CCAGGGCGAT GCCGTACAGC GCCAGCAGGC CGTGCGCGCC GAGCGGGAGC GCATCAACAC GCTTACCGAC GAATCCGAGA AGCAGCAGGC GCGTCAGGCG ATCAACCGCC AGACGCGGGA ACTCGTGCTC GACACCGAGC GTCGTCATCT GCTGAGGGCG TTGTACTCGC CCGGCCAGTT GCGCGAGCAG ATGACCTGGT TCTGGATGAA CCACTTCAGC GTCTATGCGG CCAAGGGGCA GGTCGGGTCG ATGCTGCCCG AGTATGAGGA GCGCGCGATC CGTCCGCACG CGCTGGGCAA GTTCCGGGAT CTGGTGATGG CGACGGTGAC CTCACCGGCC ATGCTGGTGT ATCTGGACAA CGCGCAGAGC GCGGCCAATC GCATCAACGA GAACTACGCG CGCGAGCTGA TGGAGTTGCA CACGCTGGGC ATATCGGGCG GACCCAGCGG CTCGCGCTAC ACGCAGCAGG ACGTGCAGGA ACTGGCACGC GTGCTGACCG GGCTGGGTGT GAACCTGCGC GGAGAGCCGC CGAAGCTAGG GCCGGCGCGC GCGGCCATGT ATCGCAGCGA CGGGCTGTTC GAATTCAATC CGAATCGCCA TGATTTCGGT TCCAAGGTGC TGCTGGGCCA GCGCATCGAG CCCACTGGCT ACAGCGAGGT GGAGCGGGCC GTGACCATCC TGTCGCGCGA TCCGGCCACG GCGCGCTTTA TCTCGGCGAA GCTGGCCACG TACTTCGTGT CCGATACCCC GCCGCAGGCA TTGGTCGACC GGATGGCCGC CACGTTCACG CGTACCGACG GCGATATCGG CGCGGTGCTG CGGACGATGC TGCTGTCGAA AGAGTTCGAC AGTGCCGCGG CCCACGGCGC GCGCAAGTTC AAGGATCCGA TGGTTTTTGT GGTCTCGTCG ATGCGCCTGG CCTATGACGG ACGGCCAGTC ACCAATCTGC GTCCGGTAAT CAACTGGCTC AATCAGTTGG GCGAGCCGCT GTATGGCCAC GTGACGCCGG ACGGCTACCC GGCCGCCGAA AGCGCGTGGG CCAGTTCGGG CCAACTGGTG CGGCGCTTCG AGATCGCGCG GACCATCGGC AACGGCCCGG CGGGCCTGTT CACTGGCGAG GATGGCCAAC CCACGCAGCG GCGTGGTTTT CCGATGCCGA ATAGCCGCAT GTTCTACGAC ACGATCGAAG CCACGCTGGG CCCCGCCACG CGCGGCGCGC TGGCGCAGGC CGGGTCTCAG CAGGAATGGA ATGCGGTATT GCTGAGTTCG CCCGAATGGA TGCAACGTTG A
|
Protein sequence | MVNPKSSARK WQRLLALLAT ATFLAACAQT PPSGATQPGS LSSADLRWLN TVSFGADQAS VQRLQTIGRE RYLEEQLHTP LADPQPVAAA IAALPVSQGD AVQRQQAVRA ERERINTLTD ESEKQQARQA INRQTRELVL DTERRHLLRA LYSPGQLREQ MTWFWMNHFS VYAAKGQVGS MLPEYEERAI RPHALGKFRD LVMATVTSPA MLVYLDNAQS AANRINENYA RELMELHTLG ISGGPSGSRY TQQDVQELAR VLTGLGVNLR GEPPKLGPAR AAMYRSDGLF EFNPNRHDFG SKVLLGQRIE PTGYSEVERA VTILSRDPAT ARFISAKLAT YFVSDTPPQA LVDRMAATFT RTDGDIGAVL RTMLLSKEFD SAAAHGARKF KDPMVFVVSS MRLAYDGRPV TNLRPVINWL NQLGEPLYGH VTPDGYPAAE SAWASSGQLV RRFEIARTIG NGPAGLFTGE DGQPTQRRGF PMPNSRMFYD TIEATLGPAT RGALAQAGSQ QEWNAVLLSS PEWMQR
|
| |