Gene Rmet_4838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4838 
Symbol 
ID4041700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1494371 
End bp1495951 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content67% 
IMG OID637980259 
Producthypothetical protein 
Protein accessionYP_586969 
Protein GI94313760 
COG category[S] Function unknown 
COG ID[COG5267] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0664961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAACC CCAAATCGAG CGCACGGAAG TGGCAGCGCC TGCTGGCGCT GCTGGCCACG 
GCAACGTTCC TGGCGGCCTG CGCCCAGACG CCGCCATCGG GGGCGACGCA GCCCGGCAGC
CTGTCGTCGG CCGACCTGCG CTGGCTGAAC ACGGTCAGCT TCGGCGCTGA CCAGGCCAGC
GTGCAGCGCC TCCAGACGAT CGGACGCGAG CGTTATCTGG AAGAGCAGTT GCACACGCCG
CTGGCAGACC CGCAACCGGT GGCGGCGGCA ATCGCGGCGC TGCCCGTCAG CCAGGGCGAT
GCCGTACAGC GCCAGCAGGC CGTGCGCGCC GAGCGGGAGC GCATCAACAC GCTTACCGAC
GAATCCGAGA AGCAGCAGGC GCGTCAGGCG ATCAACCGCC AGACGCGGGA ACTCGTGCTC
GACACCGAGC GTCGTCATCT GCTGAGGGCG TTGTACTCGC CCGGCCAGTT GCGCGAGCAG
ATGACCTGGT TCTGGATGAA CCACTTCAGC GTCTATGCGG CCAAGGGGCA GGTCGGGTCG
ATGCTGCCCG AGTATGAGGA GCGCGCGATC CGTCCGCACG CGCTGGGCAA GTTCCGGGAT
CTGGTGATGG CGACGGTGAC CTCACCGGCC ATGCTGGTGT ATCTGGACAA CGCGCAGAGC
GCGGCCAATC GCATCAACGA GAACTACGCG CGCGAGCTGA TGGAGTTGCA CACGCTGGGC
ATATCGGGCG GACCCAGCGG CTCGCGCTAC ACGCAGCAGG ACGTGCAGGA ACTGGCACGC
GTGCTGACCG GGCTGGGTGT GAACCTGCGC GGAGAGCCGC CGAAGCTAGG GCCGGCGCGC
GCGGCCATGT ATCGCAGCGA CGGGCTGTTC GAATTCAATC CGAATCGCCA TGATTTCGGT
TCCAAGGTGC TGCTGGGCCA GCGCATCGAG CCCACTGGCT ACAGCGAGGT GGAGCGGGCC
GTGACCATCC TGTCGCGCGA TCCGGCCACG GCGCGCTTTA TCTCGGCGAA GCTGGCCACG
TACTTCGTGT CCGATACCCC GCCGCAGGCA TTGGTCGACC GGATGGCCGC CACGTTCACG
CGTACCGACG GCGATATCGG CGCGGTGCTG CGGACGATGC TGCTGTCGAA AGAGTTCGAC
AGTGCCGCGG CCCACGGCGC GCGCAAGTTC AAGGATCCGA TGGTTTTTGT GGTCTCGTCG
ATGCGCCTGG CCTATGACGG ACGGCCAGTC ACCAATCTGC GTCCGGTAAT CAACTGGCTC
AATCAGTTGG GCGAGCCGCT GTATGGCCAC GTGACGCCGG ACGGCTACCC GGCCGCCGAA
AGCGCGTGGG CCAGTTCGGG CCAACTGGTG CGGCGCTTCG AGATCGCGCG GACCATCGGC
AACGGCCCGG CGGGCCTGTT CACTGGCGAG GATGGCCAAC CCACGCAGCG GCGTGGTTTT
CCGATGCCGA ATAGCCGCAT GTTCTACGAC ACGATCGAAG CCACGCTGGG CCCCGCCACG
CGCGGCGCGC TGGCGCAGGC CGGGTCTCAG CAGGAATGGA ATGCGGTATT GCTGAGTTCG
CCCGAATGGA TGCAACGTTG A
 
Protein sequence
MVNPKSSARK WQRLLALLAT ATFLAACAQT PPSGATQPGS LSSADLRWLN TVSFGADQAS 
VQRLQTIGRE RYLEEQLHTP LADPQPVAAA IAALPVSQGD AVQRQQAVRA ERERINTLTD
ESEKQQARQA INRQTRELVL DTERRHLLRA LYSPGQLREQ MTWFWMNHFS VYAAKGQVGS
MLPEYEERAI RPHALGKFRD LVMATVTSPA MLVYLDNAQS AANRINENYA RELMELHTLG
ISGGPSGSRY TQQDVQELAR VLTGLGVNLR GEPPKLGPAR AAMYRSDGLF EFNPNRHDFG
SKVLLGQRIE PTGYSEVERA VTILSRDPAT ARFISAKLAT YFVSDTPPQA LVDRMAATFT
RTDGDIGAVL RTMLLSKEFD SAAAHGARKF KDPMVFVVSS MRLAYDGRPV TNLRPVINWL
NQLGEPLYGH VTPDGYPAAE SAWASSGQLV RRFEIARTIG NGPAGLFTGE DGQPTQRRGF
PMPNSRMFYD TIEATLGPAT RGALAQAGSQ QEWNAVLLSS PEWMQR