| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4834 |
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| Symbol | ompP |
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| ID | 4041696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1488210 |
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| End bp | 1489271 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637980255 |
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| Product | putative outer membrane pore protein (gram-negative type) |
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| Protein accession | YP_586965 |
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| Protein GI | 94313756 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000215004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0137442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGAAAG CTCTATTTGC CTTGGCGGCT GCGGGTACGT GCGCCCTGTC CGGCGTTGCA
TCGGCACAAA CCGCCTCGAA CGTGACCCTG TACGGCATCG CCGACGCAGG TATTGAATTC
GCTACCCATT CCCCGGGTGG CAACGGTGGT ACCGCGGTGC GCGTGAGCTC GGGCAACATG
TCCGGTTCGC GCTGGGGCCT GCGTGGCGTG GAAGACCTGG GCGGTGGCCT GAAGGGTATC
TTCACGCTCG AGTCGGGCTT CGACATCGAC ACCGGTTTGT CCGGCCAGAG CAGCCGACTG
TTCGGTCGCC AGGCCTTTGT GGGCCTGCAG GGCGGCTTTG GTGCTGTGAC CCTGGGCCGC
CAGCAGAACG CGTTGTATGA CCTGTTCGGT GCCTACGACC CGATGGGCGT GGGTCCGAAG
TACTCGCTGA ACTCGGTTGA CTCGGGCTTC AATGGCCGCG CCGACAACTC GCTCAAGTAC
ACGGGCAAGT TCGGTGGCCT GACCGGCACC GGGTACTACA GCACGGGTGC CAACAATAAC
GGCGAAGTGC CGGGCAACTA CAAGGCTGGT CGCGCATTCG GCGCCGGCCT GGCCTACACC
GCCGGCGCCT TCTCGGTCGG CACCGCCTAT GACCAGACTC AGAGCGGCAC GCCGGCCATC
TCGGACCGCG CCATCAAACG TCTGGCCGTC GGTACGTCCT ACGACTTTGG CCCGGCCAAG
GTGTTCGCCG GCTATCGCTG GATGCGTGAC GATGGCGTGG CCACGGCTGC TACTGCCGCC
GCGCGCAACA ATGTCTACTG GCTCGGCGGC CTGTACCGCG TGACCCCGGC CCTGTCCCTG
ACTGGTGCCG CGTACTACAC TGATGCGCAT GAGAGCAACA ACGATTCGTG GATGTTCGTG
CTGTCGGCCG ATTACGCCTT CTCGAAGCGC ACCGATGCCT ATCTGAACGT GGGCTACGTG
ACCAACAAGG GCGCATCGAA CCTGGGCCTC AACGGTGCTG GCACGGCTAT CGCCGGTGCC
AACCAGACTG GCGCCATCGC AGGCATCCGT CACCGCTTCT AA
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| Protein sequence | MKKALFALAA AGTCALSGVA SAQTASNVTL YGIADAGIEF ATHSPGGNGG TAVRVSSGNM
SGSRWGLRGV EDLGGGLKGI FTLESGFDID TGLSGQSSRL FGRQAFVGLQ GGFGAVTLGR
QQNALYDLFG AYDPMGVGPK YSLNSVDSGF NGRADNSLKY TGKFGGLTGT GYYSTGANNN
GEVPGNYKAG RAFGAGLAYT AGAFSVGTAY DQTQSGTPAI SDRAIKRLAV GTSYDFGPAK
VFAGYRWMRD DGVATAATAA ARNNVYWLGG LYRVTPALSL TGAAYYTDAH ESNNDSWMFV
LSADYAFSKR TDAYLNVGYV TNKGASNLGL NGAGTAIAGA NQTGAIAGIR HRF
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