| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4830 |
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| Symbol | qseC |
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| ID | 4041692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1483786 |
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| End bp | 1485159 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637980251 |
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| Product | two-component regulatory system sensory histidine kinase |
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| Protein accession | YP_586961 |
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| Protein GI | 94313752 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00276208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0320947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGC GGCGGCGGCT GATCCTGGCC GTCCTGGCCG CCGTGACGTT TGCATGGGTA
CTGACCAGCG CATTGATCTA CCTGAGCGCC CAGGAAGAAA TCAACGAGCT CTATGACACC
GCGATGGTCC GCATGGCCCA GCAGATGCAG GCCCTGCTGC CGCGCGTGCA TACGCAAACC
TCGCCGGCGC CGCCGGCGGC GAACGGGCCG ATCCCCGGAG ATGCCGATCT GGTCGACGAG
GGGTCGGCCG GGCTTGGTGA TCTGGCGATC GCCGCATGGC GCCCCGACGG GGAGCCCCTG
CACATCGACC CGGACGGAGA TCACCTGCCC CGGCTGCCCG ACGTCCAGGG GTTCACCGAG
CGCAAGATCG ACGGCGTGCC CTGGCGGCTC TACTACCTGA ACGACCCGGC ACAAGGCTGG
CGCGTATGCG TCGGTCAGGT CAAGGCCGAG CGTGGCGAAC TGATCGTCGC GTATCTGCAG
GCGCAGGTAT TGCCTTGGGT CTTTGGTCTG CCGCTGCTGA CCACGCTGCT GCTCTGGGGC
GTGAGCCGCG CCCTGCATCC CGTGCTGACG CTGTCGCAGG CCATTGCCGC GCGCGTGCCG
GGCGATCCTA CCCCGCTGAC ACTGCATGAG GTGCCGCGCG AACTCGTGCC GCTGGTGACG
GAAATGAACA AGCTGCTGAG CCGCGCCACG GCGCTGCTCG AACATGAACG CCGCCTGACC
GCCGATGCCG CGCACGAACT GCGCACGCCG CTGGCGGCCC TGAAGGCCCA GTGGGAAGTC
GCACGCCGCT CCGACGATCC GACCGAGCGC TCCCGCGCCG CCGCCAACGT CGAGGCCGGC
ATCGACGGTA TGAGCCGGCT GGTCTCGCAA CTGTTGACGA TGAGCAGGCT CGAGGACGAA
GAGGCGCCGC CCACGCGTGG CCCGGTGGAC TGGCGGGAGG TGTCGCGGCA GGTGCTGTCG
GATTGCCTGC TGCTATCCGA ACGGCGCAAC GTCGACATGG AAGTGCTGTG GCCTCCGGCA
GGCCAGCAAC CGCTACCTGT CAACGGCGAC CCAACACTGC TCGGCACGAT GCTTCGTAAT
CTGATGGACA ACGCCATCCG CTATAGTCCG GCTGGCACGG TGGTGACGCT GGCGTTCGAA
CCTGACCGGA TTACCGTGTC CGATCGTGGC CCGGGCGTAG CACCGGAACT GCTGCGGCGG
CTCGGCGACC GCTTCTTCCG CGCCGCAGGC CAGCAGGAGC AAGGTAACGG ACTCGGGATT
TCGATCGCGC GCCGTGTGGC CGTGCTTCAT GGGCTCGCGC TGGAGTTCGC CAACCGTCAG
GCCGGCGACG GCAGTGGACT GGTGGCTGCC ATCCGCCTCA ATGGCATGTA TTGA
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| Protein sequence | MTLRRRLILA VLAAVTFAWV LTSALIYLSA QEEINELYDT AMVRMAQQMQ ALLPRVHTQT
SPAPPAANGP IPGDADLVDE GSAGLGDLAI AAWRPDGEPL HIDPDGDHLP RLPDVQGFTE
RKIDGVPWRL YYLNDPAQGW RVCVGQVKAE RGELIVAYLQ AQVLPWVFGL PLLTTLLLWG
VSRALHPVLT LSQAIAARVP GDPTPLTLHE VPRELVPLVT EMNKLLSRAT ALLEHERRLT
ADAAHELRTP LAALKAQWEV ARRSDDPTER SRAAANVEAG IDGMSRLVSQ LLTMSRLEDE
EAPPTRGPVD WREVSRQVLS DCLLLSERRN VDMEVLWPPA GQQPLPVNGD PTLLGTMLRN
LMDNAIRYSP AGTVVTLAFE PDRITVSDRG PGVAPELLRR LGDRFFRAAG QQEQGNGLGI
SIARRVAVLH GLALEFANRQ AGDGSGLVAA IRLNGMY
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