| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4828 |
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| Symbol | |
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| ID | 4041690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1481116 |
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| End bp | 1482843 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980249 |
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| Product | 4-amino-4-deoxy-L-arabinose transferase famly protein |
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| Protein accession | YP_586959 |
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| Protein GI | 94313750 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.277829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0161554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAC CCACCTCTCA GCAACGCGCG TCCGTCGCAT CCTCGCAGTC GACCCAAGGG
GCGGTCGGCT GGTCGGCCGC CACAGGCTGG GTCGTGCTGT TTGTCGCCGT GGCCCTGGTG
GTCTGGTTCG TCTCGCTGGA CATGCGCCAT CTGGTCGGGC CCGACGAAGG GCGCTATGCG
GAGATTTCGC GCGAGATGTT CGCCTCGGGT GACTGGGTGA CGATTCGTTA TAACGCGCTG
AAGTATTTCG AGAAGCCGCC ATTCCATATG TGGGTAACGG TGGTGGGCTA CGAACTCTTC
GGGCTGGGCG AGTGGCAGGC ACGGCTGGCC GTGGCGCTGT CCGGGTTGCT CGGCATCGGC
GTGTCGATGA TGGCCGCGCG TCGCTGGTTT GGCGCGCGTG CCGCGGCCTT CACCGGCCTT
GCCCTGCTGG CCGCGCCGAT GTGGAGCGTG GCGGCCCATT TCAATACGCT CGACATGACC
CTGGCGGGCG TGATGTCCTG CGTGCTGGCC TTCATGCTGA TGGGCCAGCA TCCGGACGCC
TCCGTGGCGG CGCGGCGCGG CTGGATGGTC GCCTGCTGGG CCGCGATGGG CGTGGCCATC
CTGACCAAGG GGCTGGTGGG CATCGCGCTC CCGGGGCTGG TGCTGGTGGT CTATACGCTG
GTGACGCGGG ATTGGGGCCT CTGGCGCCGC CTGCATCTGG CGCTGGGCGT CGTGGTGATG
CTCGTGATCA CGGTACCGTG GTTCTATCTG GTATCGGTCC GTAACCCCGA ATTTCCGAAC
TTCTTCTTCA TTCACGAGCA CTGGCAGCGC TACACGTCGA ATATCCACTC GCGGTCGGGC
TCGGTTTTCT ACTTCCTGCC GCTGGTCATC GGCGGGTTCC TGCCGTGGGC GGGCATCTTC
CCGAAGCTGT GGACCGCCAT GCGCGCGCCG GTCGAAGGCA CGCAGGCACG CTTCCGTCCG
GCGCTGATGG CCGGCATCTG GGCCATCGCG ATCTTCGTGT TCTTCAGCAT TTCCCGCTCG
AAGCTGCCAG GTTATATCGT GCCGGTGATC CCCGCACTGG GCATTCTCGC CGGGGTGGCG
CTCGATCGCC TGAGCCCGCG TAGCTGGGGC AAGCAACTCA TCGGCATGGC CATCGTGGCG
GCTTGCGGGC TGCTGGCCAG TCCCGTGGTG GCCACACTCA ATGCCAACCA CATTCCCAAT
TCGTTCTACC GCGCCTACGC AGTCTGGGTG GCCGTGGCCT TTGTCGTGAT GCTGCTGGGC
ATCGCGGTGG CCCGCCTGCT GCTGCGCCGT GGCGTGCTGC CCAGCGTGGC GGTCTACGCG
ATGGGCATGT ACCTGGGCTT CACCGTGGCG CTGCTTGGCC ACGAGACGGT CGGCCGCCCG
GCGTCGGGCG CCGATATCGC GCCGCAGATC GCGCAGAAGC TGACGCCGGA GATGCCGCTC
TACGGCGTGC AGATGCTCGA CCATACGTTG CCGTTCTACC TGCGTCATCC GCTGATGATG
GTGGGGCAAG CCGACGAACT GACGTTTGGC GCGACGGTGG AGCCGCAGCG CGTGGTGCCC
GATGTCGACA GTTTCACCAA GCTCTGGAAG AACGGCCAGC CGGCCATGGC CGTGATGTCC
CCGGACACCT ATCTGGCGCT CGCGCCGACC TTGTCGATGT ACGTGGTGGC GCGTGACTGG
CGTCGCGTGG TGGTGGCGAA CGTGGCATCG CTTGCCGGGC CCCAGTAA
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| Protein sequence | MPQPTSQQRA SVASSQSTQG AVGWSAATGW VVLFVAVALV VWFVSLDMRH LVGPDEGRYA
EISREMFASG DWVTIRYNAL KYFEKPPFHM WVTVVGYELF GLGEWQARLA VALSGLLGIG
VSMMAARRWF GARAAAFTGL ALLAAPMWSV AAHFNTLDMT LAGVMSCVLA FMLMGQHPDA
SVAARRGWMV ACWAAMGVAI LTKGLVGIAL PGLVLVVYTL VTRDWGLWRR LHLALGVVVM
LVITVPWFYL VSVRNPEFPN FFFIHEHWQR YTSNIHSRSG SVFYFLPLVI GGFLPWAGIF
PKLWTAMRAP VEGTQARFRP ALMAGIWAIA IFVFFSISRS KLPGYIVPVI PALGILAGVA
LDRLSPRSWG KQLIGMAIVA ACGLLASPVV ATLNANHIPN SFYRAYAVWV AVAFVVMLLG
IAVARLLLRR GVLPSVAVYA MGMYLGFTVA LLGHETVGRP ASGADIAPQI AQKLTPEMPL
YGVQMLDHTL PFYLRHPLMM VGQADELTFG ATVEPQRVVP DVDSFTKLWK NGQPAMAVMS
PDTYLALAPT LSMYVVARDW RRVVVANVAS LAGPQ
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