Gene Rmet_4825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4825 
SymboltdcB 
ID4041687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1477335 
End bp1478303 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content65% 
IMG OID637980246 
Productserine/threonine dehydratase 
Protein accessionYP_586956 
Protein GI94313747 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00349984 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.301328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC TGCAACTGCC CACCTACGCC GACGTCGAAG CCGCCGCCAA ACGGATCGAA 
GGCTTTGCCA ACCGCACGCC GGTCAACACG TCGCGCACGC TCAACGAAAT GCTCGGCGCG
GAAGTCTTCT TCAAGTGCGA GAACTTCCAG CGCATGGGCG CCTTCAAGTT CCGAGGCGCG
TTCAACGCGC TGGCGAAGTT CACCGCCGAG CAACGCCGTG GCGGCGTGGT CGCGTTCTCG
TCCGGCAATC ACGCGCAGGG CATCGCGCTG TCCGCGAAGC TGCTGAACAT GCCCGCCACG
ATCGTGATGC CCCACGACGC TCCGGCCTTG AAGGTAGCGG CGACGCGGGG GTATGGCGCG
ACCGTGGTGA GCTATGACCG CTACAAGGAA GACCGTGAAG CCATCGGCCG CGATCTGGCC
GAAAAGCACG GCATGACGCT GATCCCGCCG TATGACCATC CGGATGTGCT GACGGGCCAG
GGCACCGCCG CCAAGGAACT GTTCGAGGAA GTGGGCGCGC TCGACGCCAT CTTCACCCCG
CTGGGCGGCG GCGGACTGCT CTCCGGCACC GCATTGACCA CGCGCGCGCT GGCGCCACAG
TGCCAGATCT ACGGCGTGGA GCCCGAGGCG GGCAACGACG GCCAGCAATC GTTCCGCAGT
GGTTCGATCG TCCATATCGA CACCCCGCAG ACCATTGCCG ATGGCGCTCA GACGCAGCAC
CTGGGTCAGT ACACGTTCAG CATCATCAAG CGTGACGTGA CTGATATCCT GACCGCAACA
GACGCGCAAC TGGTCGAGGC CATGCGCTTC TACGCCGAAC GGATGAAGAT GATTGTCGAG
CCGACCGGCT GCCTGGGCCT GGCGGCGGTC ATGCAGATGA AGGACGCGCT CAAGGGCAAG
CGCGTGGGCG TAGTGATCAG CGGCGGCAAC GTCGACCTGG AGCGATTCTG CTCGCTGCTG
TCAGCCTGA
 
Protein sequence
MTTLQLPTYA DVEAAAKRIE GFANRTPVNT SRTLNEMLGA EVFFKCENFQ RMGAFKFRGA 
FNALAKFTAE QRRGGVVAFS SGNHAQGIAL SAKLLNMPAT IVMPHDAPAL KVAATRGYGA
TVVSYDRYKE DREAIGRDLA EKHGMTLIPP YDHPDVLTGQ GTAAKELFEE VGALDAIFTP
LGGGGLLSGT ALTTRALAPQ CQIYGVEPEA GNDGQQSFRS GSIVHIDTPQ TIADGAQTQH
LGQYTFSIIK RDVTDILTAT DAQLVEAMRF YAERMKMIVE PTGCLGLAAV MQMKDALKGK
RVGVVISGGN VDLERFCSLL SA