Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4825 |
Symbol | tdcB |
ID | 4041687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1477335 |
End bp | 1478303 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637980246 |
Product | serine/threonine dehydratase |
Protein accession | YP_586956 |
Protein GI | 94313747 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00349984 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.301328 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCC TGCAACTGCC CACCTACGCC GACGTCGAAG CCGCCGCCAA ACGGATCGAA GGCTTTGCCA ACCGCACGCC GGTCAACACG TCGCGCACGC TCAACGAAAT GCTCGGCGCG GAAGTCTTCT TCAAGTGCGA GAACTTCCAG CGCATGGGCG CCTTCAAGTT CCGAGGCGCG TTCAACGCGC TGGCGAAGTT CACCGCCGAG CAACGCCGTG GCGGCGTGGT CGCGTTCTCG TCCGGCAATC ACGCGCAGGG CATCGCGCTG TCCGCGAAGC TGCTGAACAT GCCCGCCACG ATCGTGATGC CCCACGACGC TCCGGCCTTG AAGGTAGCGG CGACGCGGGG GTATGGCGCG ACCGTGGTGA GCTATGACCG CTACAAGGAA GACCGTGAAG CCATCGGCCG CGATCTGGCC GAAAAGCACG GCATGACGCT GATCCCGCCG TATGACCATC CGGATGTGCT GACGGGCCAG GGCACCGCCG CCAAGGAACT GTTCGAGGAA GTGGGCGCGC TCGACGCCAT CTTCACCCCG CTGGGCGGCG GCGGACTGCT CTCCGGCACC GCATTGACCA CGCGCGCGCT GGCGCCACAG TGCCAGATCT ACGGCGTGGA GCCCGAGGCG GGCAACGACG GCCAGCAATC GTTCCGCAGT GGTTCGATCG TCCATATCGA CACCCCGCAG ACCATTGCCG ATGGCGCTCA GACGCAGCAC CTGGGTCAGT ACACGTTCAG CATCATCAAG CGTGACGTGA CTGATATCCT GACCGCAACA GACGCGCAAC TGGTCGAGGC CATGCGCTTC TACGCCGAAC GGATGAAGAT GATTGTCGAG CCGACCGGCT GCCTGGGCCT GGCGGCGGTC ATGCAGATGA AGGACGCGCT CAAGGGCAAG CGCGTGGGCG TAGTGATCAG CGGCGGCAAC GTCGACCTGG AGCGATTCTG CTCGCTGCTG TCAGCCTGA
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Protein sequence | MTTLQLPTYA DVEAAAKRIE GFANRTPVNT SRTLNEMLGA EVFFKCENFQ RMGAFKFRGA FNALAKFTAE QRRGGVVAFS SGNHAQGIAL SAKLLNMPAT IVMPHDAPAL KVAATRGYGA TVVSYDRYKE DREAIGRDLA EKHGMTLIPP YDHPDVLTGQ GTAAKELFEE VGALDAIFTP LGGGGLLSGT ALTTRALAPQ CQIYGVEPEA GNDGQQSFRS GSIVHIDTPQ TIADGAQTQH LGQYTFSIIK RDVTDILTAT DAQLVEAMRF YAERMKMIVE PTGCLGLAAV MQMKDALKGK RVGVVISGGN VDLERFCSLL SA
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