| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4823 |
|---|
| Symbol | |
|---|
| ID | 4041685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 1475715 |
|---|
| End bp | 1476341 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637980244 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_586954 |
|---|
| Protein GI | 94313745 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2964] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00729669 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.42509 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAAC GCACCGCCGA GCAGCGTGTC CTGCTCGACC AGATCAAGCA GATTGCCGAT
GGCCTCGGCC AGACGCTTGC GCCGTTCTGC GAGGTCGTGG TTCATGACCT GCTGGAGCCC
GAGCAGTCGA TCCTGGCCAT CCACAACAAC CTGTCCGGCC GCGCCGTTGG CGATCCGACC
ACCGAGCTTG GTCAGGCACG CATCACCGAT CCCGACTACC CGCAGGTTCT GGCCAACTAC
GCGAACCAGT TCGCGGACGG TCGTCAGGCA AAAAGCACGT CGATCGGCAT CAAGGACGCC
AGCGGCAACT ACATTGCCGC GCTGTGCATG AATGTCGACC TGACGCTATT CCGCAGCCTG
CAGATGGCCA TGGGCCAGTT CGTCCAGACC GCCACGGACG GTCCGAAGGA AACGCTCGAT
CCTGCAGGCA CCGACGCGCT GCGCGACCGC ATCGACGCCT TCGCCGCGCG GCTGGCCACC
ACGCCGCGCG CCTTGAAAAC CGAGGAGCGG CGCGCGCTGC TGGGTGAGTT GAAGGCATCG
GGGCTGCTCG ATGTTCGACG CGCCATGGAA ACCGTCGCGG CCCATCTGGG CGTGTCGCGC
GCAGCCGTCT ACAGCTATGT CCGCTAA
|
|---|
| Protein sequence | MVKRTAEQRV LLDQIKQIAD GLGQTLAPFC EVVVHDLLEP EQSILAIHNN LSGRAVGDPT
TELGQARITD PDYPQVLANY ANQFADGRQA KSTSIGIKDA SGNYIAALCM NVDLTLFRSL
QMAMGQFVQT ATDGPKETLD PAGTDALRDR IDAFAARLAT TPRALKTEER RALLGELKAS
GLLDVRRAME TVAAHLGVSR AAVYSYVR
|
|---|
| |