| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4778 |
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| Symbol | livF10 |
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| ID | 4041640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1422430 |
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| End bp | 1423131 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980199 |
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| Product | high-affinity branched-chain amino acid transport protein of the ABC transporter ATP binding |
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| Protein accession | YP_586909 |
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| Protein GI | 94313700 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000236786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.704554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATC TGCTACGGCT GGAGACTGTC AGCGCCGGAT ATGGCGAGGC GACGGTGCTC
GAGCAGATCG ATCTGGCGCT GGGCGCCGGC GACAGCCTCG CGCTGCTGGG CCGTAACGGC
GTAGGCAAGA CTACGTTGCT GTCCACGCTG ATGGGCTTCA CGCGATTGCG TGGGGGCAAG
CTGGTCTGGC AAGGGCGGGA TCTGGCCAGG GTGCCGCCGC ATCGCCGTGC GCAGAGCGGC
ATCGGCTGGG TGCCGCAGGA GCGCTGGGTC TTTCCCTCGC TGACCGTGGA GGAGCATCTC
GGCGCGGTGG CCCGGCCCGG GCCATGGGAT GTCCAGCGTG TGTATCGGAC CTTTCCGAGG
TTGGGTGAGC GTCGGCGTAA TCTCGGCAAC CAGTTGTCTG GCGGGGAGCA GCAGATGCTG
GCCATTGGCC GGGCACTGAT GGTCAACCCC GCCCTGTTGC TGCTGGACGA GCCGATGGAA
GGGCTGGCGC CGGTCATCGT GCAGGAGTTG CAGCGCGTGA TCGCAGGGCT GATCGCAGAC
GCGGGCATGG CTGTGATCGT GGTGGAGCAA CACGCGCGGT TGGCGTTGGG CATGACCCGG
CAGGCGATTG TTCTGGACCG GGGCCGAGTG GTGCACCGGT CGGATAGCGC AACACTGCTG
GCCAACAAGG CGTTGCTGGA TCGGCTGGTT TCGGTCCGAT AG
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| Protein sequence | MSDLLRLETV SAGYGEATVL EQIDLALGAG DSLALLGRNG VGKTTLLSTL MGFTRLRGGK
LVWQGRDLAR VPPHRRAQSG IGWVPQERWV FPSLTVEEHL GAVARPGPWD VQRVYRTFPR
LGERRRNLGN QLSGGEQQML AIGRALMVNP ALLLLDEPME GLAPVIVQEL QRVIAGLIAD
AGMAVIVVEQ HARLALGMTR QAIVLDRGRV VHRSDSATLL ANKALLDRLV SVR
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