Gene Rmet_4768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4768 
Symboleda 
ID4041630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1412420 
End bp1413061 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content64% 
IMG OID637980189 
Product2-keto-3-deoxy-phosphogluconate aldolase 
Protein accessionYP_586899 
Protein GI94313690 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCC ACGCTTCCCC TCTGCTCGAA CGACTGACCA ATGTGCCGGT GATTCCGGTG 
CTCGAATACC ACTCCGTCGA CGACGCGCTG CATATCAGCG AGGCCTTGGT GGCCGGAGGC
CTGCCGCTGC TTGAGATCAC GCTGCGCACA CCGGTGGCAT TGCAGGCGAT GGAAGCCGTC
GCCAAGGCCT TGCCGGAAGC AGTGGTCGGC GCGGGAACCG TCCTGACGAC TGACCAACTC
CAGGCGGTAC GTGATGCTGG CGCTCAGTTC GCGGTGTCGC CTGGGCTGAC GCAGAAGCTG
GCCGATGGCG CTCAAGATGC GGGTATTTCG CTGCTGCCGG GCGTGGCGAC TGCGAGCGAG
GCGATGTTCG CGCTCGAAGC GGGCTTCTCA TTCCTGAAGT TCTTCCCGGC GGAGGCAGCC
GGGGGCGTGC AGATGCTGAA ATCGCTGCAC GGGCCGTTCT CTCAGCTCAA ATTCTGCCCG
ACTGGAGGTA TCGATCTGGC GAAAGCGCCC AACTATCTGG CCTTGCCCAA CGTTGTGTGC
GTAGGCGGTT CGTGGGTGGT GCCGAAGGAT GCGGTTGCGG CGAAGGATTG GGGGCGAATC
CGCAAGCTGG CCGAAGAGGC GGCCCAGTTG CGGAAGGTCT GA
 
Protein sequence
MPIHASPLLE RLTNVPVIPV LEYHSVDDAL HISEALVAGG LPLLEITLRT PVALQAMEAV 
AKALPEAVVG AGTVLTTDQL QAVRDAGAQF AVSPGLTQKL ADGAQDAGIS LLPGVATASE
AMFALEAGFS FLKFFPAEAA GGVQMLKSLH GPFSQLKFCP TGGIDLAKAP NYLALPNVVC
VGGSWVVPKD AVAAKDWGRI RKLAEEAAQL RKV