| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4758 |
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| Symbol | ribB |
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| ID | 4041619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1404435 |
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| End bp | 1405121 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980179 |
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| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| Protein accession | YP_586889 |
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| Protein GI | 94313680 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.181589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGACCC TTACCAAATC CACCAGCCTT CCTGATTCCA CCGCCGCACT GGCGCCATCC
GATGCCGACG CGCGTCCACT GGCCGAGCGC ATCGCGCAGG CCCTCGATGC GATGCGCGAT
GGCCGTCCGG TCGTACTGCT CGACGATGAC GACCGCGAAA ACGAGGCAGA CCTGATTCTT
GCAGCGGAGC GGCTGACGAA CTCGAACATG GCCATGATGA TCCGCGAATG CAGCGGCATC
GTCTGCCTGT GCCTCACGCC GGAGAAGGTG CGGCAACTCG GCCTGCGGCC GATGGTCGAG
AACAATCGCA GCCAGTACGG CACTGCGTTC ACGGTATCGA TCGAGGCGCG TGAAGGCGTG
ACCACCGGTG TCAGCGCGGC GGACCGGATC ACGACCATTC GCGCAGCCAT CGCCGATGAG
GCGGGCCTTG ATGCCGTGGT GAGCCCCGGA CACGTGTTTC CTCTGGTAGC AGTGGAAGGG
GGTGTGCTGG CGCGTCGCGG GCATACCGAG GGCTCGGTCG AGCTTGCGCG CATGGCGGGA
CTGTCGCCGG CCGCGGTGTT GTGCGAGTTG ATGAATCCCG ATGGCACGAT GGCACGCAGG
CCCGAAGCGC TGGCGTTTGC CGAGATGTAT CAGTTGCCAG TACTGACGAT CGCCGATCTG
GTGGCGTGGC GGGAAATTAA CGCCTGA
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| Protein sequence | MLTLTKSTSL PDSTAALAPS DADARPLAER IAQALDAMRD GRPVVLLDDD DRENEADLIL
AAERLTNSNM AMMIRECSGI VCLCLTPEKV RQLGLRPMVE NNRSQYGTAF TVSIEAREGV
TTGVSAADRI TTIRAAIADE AGLDAVVSPG HVFPLVAVEG GVLARRGHTE GSVELARMAG
LSPAAVLCEL MNPDGTMARR PEALAFAEMY QLPVLTIADL VAWREINA
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