| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4751 |
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| Symbol | mscS |
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| ID | 4041612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1395411 |
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| End bp | 1396277 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637980172 |
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| Product | mechanosensitive ion channel protein |
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| Protein accession | YP_586882 |
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| Protein GI | 94313673 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.319564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACTT CTTCGTTGCA AAGCATCCGC GATGTGATTT ATGGCTATGC CACTGTTTTC
GGCGTCAAGA TCCTTGCCGC CCTCGCCTTC TGGGTGGTCG GCCGCTGGCT GATTCATTTC
GTGGTGCGCA TGGTCCAGAA TTCGCTGGCC AGGCAGAAGG TAGACCCGAC GCTGCTGCGC
TACGTTGGCT CGATCGTTAC CGTCACGCTG AATGTCGTGC TGGTCATCGG CATCCTCGGC
TACTTCGGCA TCCAGACTAC GACGTTTGCG GCGCTGATCG CCGCAGCCGG TGTTGCTATC
GGTATGGCCT GGTCTGGCCT GATGTCGAAC TTCGCGGCCG GCGCGTTCCT GGTGGTCCTG
CGTCCGTTCA AGGTCGGGGA TTTTGTATCC GTCGGTGGTG TCACCGGCAC GGTGCGCGAG
ATCGGCCTGT TCTCCACCAC GCTCGACACG CCCGACAACG TCATGACGGT CGTCGGCAAC
AACAAGATCT TCAGCGACAC GATCCAGAAT TTCTCGGCCA ATGCGTTCCG CCGGGTCGAA
TTGAAGGCGC AACTTGCCGG GTCGACGGAC GTGGCAGCCG CCACGGCTTT GCTCAAGGAA
AAGATCGCGG CCATTCCGAA CGTGCTGACC GAACCGCCCG TCGATGTCGA GATCCTTGAA
TTCACGTTGG TTGGCCCGGT CTTGGCCGTC CGCCCCTACT GCCATACCGA TCACTACTGG
CAGGTCTATT TCGATACCAA TCGCACGATT CGCGACAGCT TCGGCCAGGC GGGCTTCCAG
GCGCCGATGC CGGCCCAGGT CGTGGTGATG CAGAACGCGC CGGCCGTATC GGTAGCATCG
GGCACGCCGG CAAACCAGGC GGCCTGA
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| Protein sequence | MDTSSLQSIR DVIYGYATVF GVKILAALAF WVVGRWLIHF VVRMVQNSLA RQKVDPTLLR
YVGSIVTVTL NVVLVIGILG YFGIQTTTFA ALIAAAGVAI GMAWSGLMSN FAAGAFLVVL
RPFKVGDFVS VGGVTGTVRE IGLFSTTLDT PDNVMTVVGN NKIFSDTIQN FSANAFRRVE
LKAQLAGSTD VAAATALLKE KIAAIPNVLT EPPVDVEILE FTLVGPVLAV RPYCHTDHYW
QVYFDTNRTI RDSFGQAGFQ APMPAQVVVM QNAPAVSVAS GTPANQAA
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