Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4748 |
Symbol | |
ID | 4041609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1392494 |
End bp | 1393003 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637980169 |
Product | Thioesterase superfamily |
Protein accession | YP_586879 |
Protein GI | 94313670 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.198787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAT CTGGATTTCC TGCGATGAAC GATCTGTCCC ACCAGCTTTC CATGACCGTG CTGATGACGC CGGACATGGC CAATTTCTCC GGCAATGTCC ACGGCGGCAC GATCCTGAAA TACCTCGATA TGGTGGCCTA CGCCTGCGCC AGCCGCTATG CCGGCCGCTA CGTGGTTACG CTGTCGGTGG ACCAGGTGAT GTTCCGCCAG CCGATCCATG TGGGCGAACT TGTGACGTTC CTGGCTGCCG TCAACTTCAC GGGCCGCAGC TCGATGGAGA TCGGTATCAA GGTGGTGACC GAGAATATCC GCAGCAAGGT CGTGCGCCAT ACCAATAGCT GCTACTTCAC GATGGTCGCC GTTGACGACA ACGGTGCGCC GGCCGAAGTG CCGCCGCTGC AGCCGCGTGA CGAAGTGGAG CGCCAGCGTT TCGAAGCCGC CAAGCAGCGA CGCGCGCTGC GCCAGGAAAT GGAACGTCGC CACGACGAGA TCAAAGGCTC CACACCGTGA
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Protein sequence | MPESGFPAMN DLSHQLSMTV LMTPDMANFS GNVHGGTILK YLDMVAYACA SRYAGRYVVT LSVDQVMFRQ PIHVGELVTF LAAVNFTGRS SMEIGIKVVT ENIRSKVVRH TNSCYFTMVA VDDNGAPAEV PPLQPRDEVE RQRFEAAKQR RALRQEMERR HDEIKGSTP
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