Gene Rmet_4748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4748 
Symbol 
ID4041609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1392494 
End bp1393003 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content61% 
IMG OID637980169 
ProductThioesterase superfamily 
Protein accessionYP_586879 
Protein GI94313670 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.198787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAT CTGGATTTCC TGCGATGAAC GATCTGTCCC ACCAGCTTTC CATGACCGTG 
CTGATGACGC CGGACATGGC CAATTTCTCC GGCAATGTCC ACGGCGGCAC GATCCTGAAA
TACCTCGATA TGGTGGCCTA CGCCTGCGCC AGCCGCTATG CCGGCCGCTA CGTGGTTACG
CTGTCGGTGG ACCAGGTGAT GTTCCGCCAG CCGATCCATG TGGGCGAACT TGTGACGTTC
CTGGCTGCCG TCAACTTCAC GGGCCGCAGC TCGATGGAGA TCGGTATCAA GGTGGTGACC
GAGAATATCC GCAGCAAGGT CGTGCGCCAT ACCAATAGCT GCTACTTCAC GATGGTCGCC
GTTGACGACA ACGGTGCGCC GGCCGAAGTG CCGCCGCTGC AGCCGCGTGA CGAAGTGGAG
CGCCAGCGTT TCGAAGCCGC CAAGCAGCGA CGCGCGCTGC GCCAGGAAAT GGAACGTCGC
CACGACGAGA TCAAAGGCTC CACACCGTGA
 
Protein sequence
MPESGFPAMN DLSHQLSMTV LMTPDMANFS GNVHGGTILK YLDMVAYACA SRYAGRYVVT 
LSVDQVMFRQ PIHVGELVTF LAAVNFTGRS SMEIGIKVVT ENIRSKVVRH TNSCYFTMVA
VDDNGAPAEV PPLQPRDEVE RQRFEAAKQR RALRQEMERR HDEIKGSTP