| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4745 |
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| Symbol | |
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| ID | 4041606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1389349 |
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| End bp | 1390113 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980166 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_586876 |
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| Protein GI | 94313667 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.146753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0678899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTGT TCGATCTGTC GGGCAAGGTA GCCATCATTA CCGGTTCTTC GCGCGGCATC
GGCCGGGCCA TCGCCGAGCA GCTTGCCATC CAGGGCGCGA AGGTCGTCGT CTCCTCGCGC
AAGATCGAGG CCTGCCAGGA AGTCGTCGAC GCCATCAACG CCAAGCACGG CGCGGGCACC
GCGCTGGCCG TGGCCGCCAA TATCTCGTCG AAGGATGCAC TGCAGCATCT GGTGGACGAA
ACCAATCGCG TCTACGGCAA GGTCGACGTG CTGGTCTGCA ACGCGGCATC GAACCCCTAC
TACGGCCCGA TGAGTGGCGT GAGCGACGAG CAATTCCGCA AGGTGCTCGA CAACAACGTG
ATCTCGAACC ACTGGCTGAT CCAGATGGTG GCGCCGCAGA TGATCGAACG CCGCGAGGGC
TCGATCATCA TCGTGTCGTC GATCGGTGGC CTGCGCGGCT CGCCCACGAT CGGGGTCTAC
AACGTGTCCA AGGCCGCCGA TTTCCAGTTG GCCCGCAATC TGGCCGTGGA GTTCGGGCCG
CACAACGTAC GCGTGAACTG CATTGCCCCG GGCCTGATCA AGACCGATTT CGCACGTGCC
CTCTGGGAAG ATCCGGTGCG TTACAAGCAA TCCACCGAGA ACGCGCCGCT GCGCCGCATC
GGCGAACCGG TGGAAATCGC GGGCGCGGCC TGCTATCTGG CTTCCGCCGC CAGCACGTTC
ATGACGGGCC AGGCACTGGT TGTTGACGGG GGCGTTACCA TCTGA
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| Protein sequence | MSLFDLSGKV AIITGSSRGI GRAIAEQLAI QGAKVVVSSR KIEACQEVVD AINAKHGAGT
ALAVAANISS KDALQHLVDE TNRVYGKVDV LVCNAASNPY YGPMSGVSDE QFRKVLDNNV
ISNHWLIQMV APQMIERREG SIIIVSSIGG LRGSPTIGVY NVSKAADFQL ARNLAVEFGP
HNVRVNCIAP GLIKTDFARA LWEDPVRYKQ STENAPLRRI GEPVEIAGAA CYLASAASTF
MTGQALVVDG GVTI
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