| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4735 |
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| Symbol | garP |
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| ID | 4041596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1378805 |
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| End bp | 1380166 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980156 |
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| Product | galactarate transporter |
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| Protein accession | YP_586866 |
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| Protein GI | 94313657 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.388057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.513803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCA CCCCCACCAC AGGCGCTGCA GCCGCATCCA CCGCGCGGCG CACCAATGTC
CGTTACTGGA TTCTCGCGCT GATTTTCATC GTGACCACGG TCAACTACGC GGATCGTGCC
ACGCTGTCGA TTACCGGGCC CGCGATGCGC GAGGAATTCG GTTTCTCGGC CGTCCAGATG
GGCTATATCT TCTCGGCCTT CAGTTGGTCG TACGTGATGG CGCAGATTCC TGGCGGCTGG
CTACTCGATC GCTTTGGCGC CCGGCGCATC TATGCCGTGA GCATCTTCCT CTGGTCATTC
TTCACGCTGC TGCAGGGGTG GGTCGGCATC TTCGCCTCGA TGGGAGCAAC GATGACGGCG
CTCTTCATGC TGCGTTTCGC CGTGGGCCTG GCCGAGTCCC CGGCATTCCC GGCCAATGCA
AAGGTGGTGG CAAGCTGGTT CCCGACCGCC GAGCGCGGCA CCGCGTCGGC CATCTTCAAC
GCCGCGCAGT ACTTCGCCGC CGTGGTGTTC ACGCCGCTGA TGGCATGGAT CGTTCACAGC
ATGGGCTGGC ATCACGTCTA CCTGTGGATG GGCATCATGG GCATGCTGCT GGCGATGCTC
TGGCTCAAGG TCATGCGCAG CCCGGTCACG CATCCGGCTG TGAATCGCGC GGAACTTGAG
CACATCGAGC AGGGCGGTGG CCTGATTCAC ATGAATGAAG GGGCAGGCAA GTCAAAGCAG
GGCGCTAATC CCGCTGGCTG GTTCTATGCC CGGCAGTTGC TGTCGAACCG GATGCTGGCC
GGGGTCTATC TGGGCCAGTA CTGCATCAAC GTGCTGACGT ACTTCTTCCT CACGTGGTTT
CCGGTGTACC TGGTGCAAGC GCGCGGCATG TCGATCCTGA AGGCGGGTTT CGTCGCGTCC
CTGCCGGCCA TCTGCGGTTT TCTCGGCGGC GTGCTGGGCG GCGTGATCTC CGACCACTTG
CTGCGCCGCG GCTACTCACT GACCATCGCC CGCAAGGTGC CGATCGTGGC GGGCATGTTG
CTGTCGGTGT CCATGATCGC CTGCAACTAC GTGGATGCCG AATGGCTGGT GGTGGGCATC
ATGGCGCTCG CGTTCTTCGG CAAGGGCATC GGCGCGCTGG GCTGGGCCGT GGTGGCTGAC
ACTGCGCCCA AGGAAGTGAT CGGCCTGGCG GGCAGCATCT TCAACACGTT CGGCAATATC
GCCGGCATTG TGACGCCGAT CGTGATCGGC TATATCCTGA GCGCGACAGG CTCGTTCAAC
GGCGCGCTGG TGTTCGTGGG TATCAATGCC CTGGTCACCG TGCTGAGCTA TCTGGTGATC
GTCAAGGACA TTCGCCGCGT CGAGCTGAAG CACCCCCAAT AA
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| Protein sequence | MNATPTTGAA AASTARRTNV RYWILALIFI VTTVNYADRA TLSITGPAMR EEFGFSAVQM
GYIFSAFSWS YVMAQIPGGW LLDRFGARRI YAVSIFLWSF FTLLQGWVGI FASMGATMTA
LFMLRFAVGL AESPAFPANA KVVASWFPTA ERGTASAIFN AAQYFAAVVF TPLMAWIVHS
MGWHHVYLWM GIMGMLLAML WLKVMRSPVT HPAVNRAELE HIEQGGGLIH MNEGAGKSKQ
GANPAGWFYA RQLLSNRMLA GVYLGQYCIN VLTYFFLTWF PVYLVQARGM SILKAGFVAS
LPAICGFLGG VLGGVISDHL LRRGYSLTIA RKVPIVAGML LSVSMIACNY VDAEWLVVGI
MALAFFGKGI GALGWAVVAD TAPKEVIGLA GSIFNTFGNI AGIVTPIVIG YILSATGSFN
GALVFVGINA LVTVLSYLVI VKDIRRVELK HPQ
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