| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4734 |
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| Symbol | garD |
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| ID | 4041595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1377196 |
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| End bp | 1378788 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980155 |
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| Product | galactarate dehydratase |
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| Protein accession | YP_586865 |
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| Protein GI | 94313656 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2721] Altronate dehydratase |
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| TIGRFAM ID | [TIGR03248] galactarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.481286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.735479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACT TGTCGGTACA AAACGCGCAG GGCCAGGCCG CCGAACGCGC GCCGCTCTAC
ATCCGCATTC ACGCCAATGA CAACGTGGCC ATCGTCGCCA ACGACGGCGG GCTGCCAGCC
GGCTCAGTAT TCCCGTGCGG TCTGACGCTC GTGGAGCGCG TGCCGCAGGG CCACAAAGTG
GCGCTGGTGG ATCTAAAGAA AGGTGACGCG GTTACGCGCT ACAACGTGAC CATCGGCTAC
GCCTTGCAGG ACCTGCCGCG CGGCGCGTGG GTCAACGAGC GCGTGATTGA AATGCCAACC
GCGCCGGGAC TGACCGATCT GCCGATCGGC ACACGTGTGC CCGAGCCGCT GCCGCCGCTG
GAAGGCTATA CGTTCGAGGG TTTCCGCAAT CCGGACGGAT CGGTCGGCAC GCGCAACATT
CTGGCGATCA CGACCACGGT GCAGTGCGTG TCCGGCGTAG TGGAGCACGC GGTGCACCGG
ATCAAGACCG AGCTGCTGCC GCGCTATCCG AACGTCGACG ACGTGATCGG CCTCGAGCAT
ACCTATGGCT GCGGCGTGGC GATCGATGCG CCCGACGCGA TCGTGCCAAT CCGCACGCTG
CGCAATATCG CGCTGAATCC GAACTTCGGC GGCACCGCCA TGATGGTGAG CCTGGGGTGC
GAGAAGCTGC AGCCGGAACG CCTGATGCCG CCGGGCACAA TCCCGATCCA GACCGGCGCC
GGCGAGGTGC AGGTGGGCGT GGTTTGCTTG CAGGACGACA AGCACGTGGG TTTCGCGTCG
ATGATCGACT CGATCATGGC GATGGCCGAG ACCCATCTGC AGACCCTCAA TGCCCGCAAG
CGCGAGACGG TGCCCGTATC GGAACTGGTG GTGGGCGTGC AGTGCGGCGG TAGCGATGCG
TTCTCCGGCG TGACGGCCAA TCCGGCTGTC GGCTTTGCCA CAGACCTGCT CGTGCGCGCC
GGCGCGACCG TGATGTTCTC GGAAGTGACC GAGGTCCGCG ACGGTATTGA CCAGCTCACC
GCCCGCGCCG CTACCCCCGA GGTGGCCGAA GCGATGATTC GGGAAATGGA CTGGTACGAC
CGCTATCTGG ACCGTGGTCG CGTCGATCGC AGCGCCAACA CGACGCCAGG CAACAAGAAG
GGTGGCCTGT CGAATATCGT GGAAAAGGCC ATGGGTTCGA TCGTCAAGTC GGGCAGCGCG
CCGATCTCGG GCGTGGTGTC ACCGGGCGAG AAGGTCAAGC AGAAGGGCTT GATCTACGCG
GCGACCCCGG CCAGCGATTT CATCTGTGGC ACGCTGCAAC TGGCTGCCGG CATGAACCTG
CACATCTTCA CGACGGGGCG CGGCACGCCG TATGGTCTGG CCGAGGTGCC CGTGATCAAG
GTCGCAACGC GCAGCGATCT GGCGCGCCGC TGGCACGACC TGATGGACGT GAACGCAGGC
CGCATCGCCA CGGGCGAAGC CACGATCGAG GATGTGGGCT GGGAGTTGTT CCACCTGATG
ATCGACGTGG CCAGCGGCCG CAAGCAGACC TGGGCCGAGC ACCACAAGCT GCATAACGCG
CTGGCGCTGT TCAATCCGGC GCCGGTGACC TGA
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| Protein sequence | MSDLSVQNAQ GQAAERAPLY IRIHANDNVA IVANDGGLPA GSVFPCGLTL VERVPQGHKV
ALVDLKKGDA VTRYNVTIGY ALQDLPRGAW VNERVIEMPT APGLTDLPIG TRVPEPLPPL
EGYTFEGFRN PDGSVGTRNI LAITTTVQCV SGVVEHAVHR IKTELLPRYP NVDDVIGLEH
TYGCGVAIDA PDAIVPIRTL RNIALNPNFG GTAMMVSLGC EKLQPERLMP PGTIPIQTGA
GEVQVGVVCL QDDKHVGFAS MIDSIMAMAE THLQTLNARK RETVPVSELV VGVQCGGSDA
FSGVTANPAV GFATDLLVRA GATVMFSEVT EVRDGIDQLT ARAATPEVAE AMIREMDWYD
RYLDRGRVDR SANTTPGNKK GGLSNIVEKA MGSIVKSGSA PISGVVSPGE KVKQKGLIYA
ATPASDFICG TLQLAAGMNL HIFTTGRGTP YGLAEVPVIK VATRSDLARR WHDLMDVNAG
RIATGEATIE DVGWELFHLM IDVASGRKQT WAEHHKLHNA LALFNPAPVT
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