| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4706 |
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| Symbol | |
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| ID | 4041567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1348369 |
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| End bp | 1350573 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980127 |
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| Product | putative secretion type II protein |
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| Protein accession | YP_586837 |
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| Protein GI | 94313628 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.142199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACCT CACGTGGGCC CAGGCTGATC CGGGCGAGAT GCAAAGCGCA GCCCATCTGC
ATCGGCGTCA TCCTGTTGGG AACCTGCCTT GCCGGTTGCT CGCCCATGTA CCAGCGATTC
CCGCCGGACC CGAGCACCAA TGCAGAGCAG ATCGTCGGCG CGCTGCGCGA GCGGGACAGG
CAGGTCAATG CACTGCTCGA GGAGGCGGAG CGACTACGCG CGGCAGGCCA GTACCAGGAC
GCCGTTCCGC TGCTTGGCGC GGCGAACCAG CTGGACCCCA CCAACGAGCG CGCGCGCATT
CTTGGCGCGG CGCTGCAGCG TGACTGGCGC GACGCGGCCA TCCTGCAGGA AGCGGAGCGT
ATGTTCGATC GTGGCTCCTA CGATATTGCA GCGGAGCGCG TCCGCTACGT GCTTGCCGAG
AATCCGAACA GCATTGCCGG CAGACAACTG GCCCAGCGTA TCGAGGAGCA ACGCCGTCTG
CTGCGGCTTG CGCGTGAGGA ACAGCGCGCG GCGGGGTCCA TCATGCGCAC GCCGGTGACC
CTGCAGTTCC GCGATGCCAA CATCCGCATG GTGTTCGAAG CACTATCCCG TACCTCCGGT
CTCAATGTCA TCTTCGACCG GGATGTGCGT GCCGATCTCA AGACCACGAT TTTCGTGACC
AATGCGGCAA TCGAGGACGC GGTGGATCTG ATCCTGCTGC AAAGCCAGCT CGACAAGAAG
GTGCTGAACG CCAACACGCT GTTCATCTAC CCAGCCACGC CCGCCAAGCA GCAGGAGTAT
CAGGAGCTCA AGGTCCGCAC ATTCCAGCTG TCGAATGTCG ACTCCAAGCA GGTCCAGTCG
CTGCTGAAGA GTCTGCTGAA GATCAAGGAA GTCGTGGTCG ACGAACGCGC GAACACCGTG
ACCATTCGCG GTACGCCAGA CACGATTCGC GTGGCGGAGC AGATGATCGC CGCGCAGGAC
CTGCCGGAGC CGGAAGTCAT GCTCGAAGTC CAGGTTCTGG AGGTGTCGCG CGAGCGTCTG
ACCGACCTTG GCATCGCATG GCCAAATTCG TTCACGATGG CCACACCAGC CTCTGCGACG
ACATGGGGCG TGCTGCACCA CCTGACCGCC AACGAGCTTG AAGTGAGTCC GTTGTCGGCG
ACAGCCAACT TCAAGCTGAC CGATACCGAT GCCAATCTGC TCGCCAGCCC GCGGATTCGT
ACGCGAAACA AGGAGAAGGC AAGGATCCTG ATTGGCGACA AGGTGCCGGT GATCTCCAGT
TCCAGCACGC CCAGCACGAG CGGACCATCG TTCACCCAGA CGATCCAGTA TCTGGATGTC
GGCATCAAGC TGGAAGTGGA GCCCCAGGTG TATCGCGACA ACGACGTGGG CATCAAACTG
GCCCTGGAGG TCAGCAATAT CACCAAGACG ATCCAGAGCG GCAACGCGCA GACGGGCCTG
AGTTCGCTGG CTTACCAGAT TGGCACGCGC AGCGCGTCCA CGAGCCTGCG ACTGCGGGAC
GGCGAAACGC AGATACTCGG CGGGCTGATC TCGGATCAGG ATCGGACGTC TGCCGACAAG
GTGCCCGGGC TGGGGCAGTT GCCGGTGGTT GGGAGGCTGT TCTCCGACCA CAATGGTGAC
CACGTCAAGA CCGAGATCGT GCTGCAGATC ACGCCGCATA TCGTACGCCC GCAACTGACG
ATGGATAGCG ACACGCGCGA GCTCTGGTCC GGCACCGATA CCAATGTCCG CACCGAACAA
TTGCGGCTGG ACCCGAGCCG TCCCGTCGCA TCGACGGCAT CCGGCGCGCC TGCGTTGCCC
TATACGCCGG TCAAGCCTGG ACAGGTAGGT GGCGGAACCA TGGGGCCGCC ACCGGCCGCA
AGCGGCAGCG CTGCAGCAAC GCCAAAGAGT GCATTCGGGC AGCCTCCGCC GCCGATGCGG
ACCACGCCGC CACCGGCTCC CTATAACGGT CGCTTCTCGG GCACGCCTGC GGTGCCGCAG
GGGCAGGCAG CGCCAGCCGG CACAGCCGAG CCGGCGCCGC CACCACCCGT GCCGGCGTCT
GGCAACGCCG ACGGCTCGGC CGAAAATACG GCGCCGCCGC CAGCGCCACG TGGTCCGGTG
CAGGTGGAGC TGATTCCACC GACGCCGCCC GCGCCAATGC CCCGGCAGCC GACGGACATC
CCCAGCGACA ATCCGCTGTA CTCGATCCCC GGCGGCAGCC CCTGA
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| Protein sequence | MHTSRGPRLI RARCKAQPIC IGVILLGTCL AGCSPMYQRF PPDPSTNAEQ IVGALRERDR
QVNALLEEAE RLRAAGQYQD AVPLLGAANQ LDPTNERARI LGAALQRDWR DAAILQEAER
MFDRGSYDIA AERVRYVLAE NPNSIAGRQL AQRIEEQRRL LRLAREEQRA AGSIMRTPVT
LQFRDANIRM VFEALSRTSG LNVIFDRDVR ADLKTTIFVT NAAIEDAVDL ILLQSQLDKK
VLNANTLFIY PATPAKQQEY QELKVRTFQL SNVDSKQVQS LLKSLLKIKE VVVDERANTV
TIRGTPDTIR VAEQMIAAQD LPEPEVMLEV QVLEVSRERL TDLGIAWPNS FTMATPASAT
TWGVLHHLTA NELEVSPLSA TANFKLTDTD ANLLASPRIR TRNKEKARIL IGDKVPVISS
SSTPSTSGPS FTQTIQYLDV GIKLEVEPQV YRDNDVGIKL ALEVSNITKT IQSGNAQTGL
SSLAYQIGTR SASTSLRLRD GETQILGGLI SDQDRTSADK VPGLGQLPVV GRLFSDHNGD
HVKTEIVLQI TPHIVRPQLT MDSDTRELWS GTDTNVRTEQ LRLDPSRPVA STASGAPALP
YTPVKPGQVG GGTMGPPPAA SGSAAATPKS AFGQPPPPMR TTPPPAPYNG RFSGTPAVPQ
GQAAPAGTAE PAPPPPVPAS GNADGSAENT APPPAPRGPV QVELIPPTPP APMPRQPTDI
PSDNPLYSIP GGSP
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