| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4703 |
|---|
| Symbol | |
|---|
| ID | 4041564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1346784 |
|---|
| End bp | 1347395 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637980124 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_586834 |
|---|
| Protein GI | 94313625 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0262832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCGA TGCCTAGTGC GCGTCTGGTG CGTGGATGCC TTCGTCGCAG GCGAGGGCAG
GGGCTGGTCC TGCTGTCGCT TTTGATCGCG CTGTTGCTGA TGGCGATCGC GATGGAAGGG
GCGCTGGACG TGTGGGCGCT GCAACGACAG CGACAGATGG AAGAAGAACT GCTCTTCGTT
GGCGAACAGT ACAGGCAGGC GATCCAGAGC TATTACCTGG TGGGACGCGC GCTTCCGGCA
TCCATCGACG ATCTGCTCGA GGACAAACGG TTTCCCGTGC CGTTGCACCA CTTGCGACGC
GCCTATCCGG ACCCGATGAC GGGCAAGGCC GACTGGAAAC TGTTGATCGA AGGTGGCCGG
ATCTACGGCG TCTACAGCAG CTCGACCGCC GAGACGATCA AACGGGCGAG GTTTCCCAGA
CGCTACGCCG AGTTCGCGAA CGCCAAGACC TACGCCGAAT GGCAGTTTTT CTATGTGCCT
CCTGGCCGCG GCATTCCGGG CACGAACCCC GGGCCGCAGA CGCCAGCGCC GAACACGCGC
GGTGGGAAAG GGGCAGTGCC GGGCAACGGG AACAGGACCT CTCCATTCGC GCCATTGCGG
CCGGGCGGTT GA
|
|---|
| Protein sequence | MSPMPSARLV RGCLRRRRGQ GLVLLSLLIA LLLMAIAMEG ALDVWALQRQ RQMEEELLFV
GEQYRQAIQS YYLVGRALPA SIDDLLEDKR FPVPLHHLRR AYPDPMTGKA DWKLLIEGGR
IYGVYSSSTA ETIKRARFPR RYAEFANAKT YAEWQFFYVP PGRGIPGTNP GPQTPAPNTR
GGKGAVPGNG NRTSPFAPLR PGG
|
|---|
| |