Gene Rmet_4676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4676 
SymbolcatD2 
ID4041537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1308374 
End bp1309153 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content68% 
IMG OID637980097 
Product3-oxoadipate enol-lactonase 
Protein accessionYP_586807 
Protein GI94313598 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR02427] 3-oxoadipate enol-lactonase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.256206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.172762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTG CCGATCTCTC CGACGTCCGC ATCCATTACC GCCTGGATGG CGCCGAGCAC 
CTGCCGGTGC TGGTGCTGTC CAACTCGCTC GGCACCACCC TCGACATGTG GCAGCCGCAG
ATCGCCGCGC TGTCCCAACA CTTCCGCGTG CTGCGCTATG ACACGCGCGG CCATGGCGAG
TCGGGCGTGA CGCCCGGCCC GTACAGCATC GCGCAGCTTG GCGGCGATGT GATCGGGCTG
CTCGACCATC TGGGTCTGCA GCGCGTGCAT TTCTGCGGGT TGTCGATGGG CGGCATCACC
GGCATGTGGC TGGCGCTGCA TCACGCCGAT CGCCTGAACC GCCTCGTACT GTGCAACACC
GCGGCCTATA TCGGCCCGCC CGAGAACTGG ACCAATCGCG CCGCGCTGGT GGAACGCGAG
GGCATGGCTG CGATCACGGC GGCCGTGGTC GACAAATGGC TGACGCCGGA CTTCAGCGCG
CAGCAGCCGG AACTGGTGCA GCGTCTGCAG ACCATGCTTG GGGCCACCAG TCCGAGCGGC
TATGCCGCCA ACTGCCTGGC CGTGCGCGAT TCCGATCTGC GCGCGGAGAT CCAGCGCATC
CAGACGCCGA CGCTGGTGAT CGCCGGCTCG GGCGATATCC CCACGCCGCC CGCCGACGGC
CGCTATCTGG CCGACACGAT CCCCGGCGCC CGCTACACGG AGTTGTATGC CGCCCACCTG
TCGAATCTGC AGCAGGTGGA GGGCTTCACC CAGGCCGTGC TGACGTTTCT CGGCAGCTGA
 
Protein sequence
MPFADLSDVR IHYRLDGAEH LPVLVLSNSL GTTLDMWQPQ IAALSQHFRV LRYDTRGHGE 
SGVTPGPYSI AQLGGDVIGL LDHLGLQRVH FCGLSMGGIT GMWLALHHAD RLNRLVLCNT
AAYIGPPENW TNRAALVERE GMAAITAAVV DKWLTPDFSA QQPELVQRLQ TMLGATSPSG
YAANCLAVRD SDLRAEIQRI QTPTLVIAGS GDIPTPPADG RYLADTIPGA RYTELYAAHL
SNLQQVEGFT QAVLTFLGS