Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4676 |
Symbol | catD2 |
ID | 4041537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1308374 |
End bp | 1309153 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637980097 |
Product | 3-oxoadipate enol-lactonase |
Protein accession | YP_586807 |
Protein GI | 94313598 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR02427] 3-oxoadipate enol-lactonase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.256206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.172762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTTG CCGATCTCTC CGACGTCCGC ATCCATTACC GCCTGGATGG CGCCGAGCAC CTGCCGGTGC TGGTGCTGTC CAACTCGCTC GGCACCACCC TCGACATGTG GCAGCCGCAG ATCGCCGCGC TGTCCCAACA CTTCCGCGTG CTGCGCTATG ACACGCGCGG CCATGGCGAG TCGGGCGTGA CGCCCGGCCC GTACAGCATC GCGCAGCTTG GCGGCGATGT GATCGGGCTG CTCGACCATC TGGGTCTGCA GCGCGTGCAT TTCTGCGGGT TGTCGATGGG CGGCATCACC GGCATGTGGC TGGCGCTGCA TCACGCCGAT CGCCTGAACC GCCTCGTACT GTGCAACACC GCGGCCTATA TCGGCCCGCC CGAGAACTGG ACCAATCGCG CCGCGCTGGT GGAACGCGAG GGCATGGCTG CGATCACGGC GGCCGTGGTC GACAAATGGC TGACGCCGGA CTTCAGCGCG CAGCAGCCGG AACTGGTGCA GCGTCTGCAG ACCATGCTTG GGGCCACCAG TCCGAGCGGC TATGCCGCCA ACTGCCTGGC CGTGCGCGAT TCCGATCTGC GCGCGGAGAT CCAGCGCATC CAGACGCCGA CGCTGGTGAT CGCCGGCTCG GGCGATATCC CCACGCCGCC CGCCGACGGC CGCTATCTGG CCGACACGAT CCCCGGCGCC CGCTACACGG AGTTGTATGC CGCCCACCTG TCGAATCTGC AGCAGGTGGA GGGCTTCACC CAGGCCGTGC TGACGTTTCT CGGCAGCTGA
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Protein sequence | MPFADLSDVR IHYRLDGAEH LPVLVLSNSL GTTLDMWQPQ IAALSQHFRV LRYDTRGHGE SGVTPGPYSI AQLGGDVIGL LDHLGLQRVH FCGLSMGGIT GMWLALHHAD RLNRLVLCNT AAYIGPPENW TNRAALVERE GMAAITAAVV DKWLTPDFSA QQPELVQRLQ TMLGATSPSG YAANCLAVRD SDLRAEIQRI QTPTLVIAGS GDIPTPPADG RYLADTIPGA RYTELYAAHL SNLQQVEGFT QAVLTFLGS
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