| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4671 |
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| Symbol | hyfB |
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| ID | 4041532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1303145 |
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| End bp | 1305169 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980092 |
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| Product | hydrogenase 4 subunit B |
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| Protein accession | YP_586802 |
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| Protein GI | 94313593 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.130495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGGCG TGCCTGCGGT CGGACAGTGG TTGTTGCTCG ACTGGATGCT CGTTGTCACG
GCCGCGTGGC TGATGATCGG GGCAACCGGT GTGCTCGCAC TGCATCGTCT GGCACTGGTG
TCGCGCCTGC TCTTCCCTCT GGGCGCTCTG CTCGGGCTGG TGCTCAGCGC GCTGGCTCTT
GCGGCGGTGG GTAACAGCCC CGAAGTGGCA GTGCTTTCCA TCGGGCTGCC GCGTCTGCCT
TTCCATCTCC GGCTGGATAG CCTGTCCGCC TATTTCCTGA TGGTAATCGG TGCCGCAGCG
GCCGGAATCT CCGTGTTCGC GGCGGGTTAC TTCCGCCAAG GCGAGGGCAC GCCCCCCGGC
TTGCTATGCC TGGAGTATCA CCTGTTCCTG GCCAGCATGG CTGGCGTTGT GCTGGCCGAC
GACGCCTACG CGTTCATGGT GATGTGGGAG ACCATGGCGT TGTCATCGTT CTTCCTGGCG
ACCGCCAACC ACCGCATCGC GGAGGTTCGC AGCGCCGGCT ACCTGTACAT CACCATGGCA
CACATCGGGG CGATCGCGGT CCTGTTGTGC TTTGGCGTCC TGCAGGCCAA TACCGGCGAC
TACACCTTCG CGAACATGCG CGCCCAAACG CTGACGCCGT TCTGGGCGTC GGTCGCGTTC
CTGCTTGCAA TGTTCGGCTT CGGCGCCAAG GCCGGTCTGC TTCCACTGCA TGTGTGGCTG
CCCGAAGCGC ACCCGGCTGC GCCATCGCCG GTGTCGGCAA TGATGAGTGG CGTCATGCTC
AACACCGCCA TTTATGGCCT CTTGCGTGTG GTTCTGGACC TGGCACAGAT ACATCTGTGG
TGGTGGGGCG GGCTACTGTT GGCCTCCGGC CTGGCCACCG CGCTGTATGG CGTGGTGTTC
GCCGCAGTGC AAACCGACAT GAAGCGGTTG CTGGCCTACT CATCGATTGA GAACATGGGC
CTGCTGTTCG TTGCTATTGG CCTCGCTTTG ATCTTCTCGG CCTACGGCAT GAAACCGTTG
GCCGCTCTGG CACTGACCGC AGCGCTATAT CACGTGGCCA GCCATGCCTT CTTCAAGAGC
CTGCTTTTCC TTGGTACTGG CAGCGTGCTG CATGCTACTG CCGAGCGCAG CCTCGGCAAG
CTGGGAGGTT TGATACGCCA GATGCCGTGG GTGGGCTGGC TCACGCTGGT GGGCGTGCTG
ACCAGCGCGG GTCTGCCACC GCTTGGTGGG TTCGTCTCGG AGTGGTTGCT CCTGCAGAGC
TTTCTGTTTA CGACCGGATT GCCGGTGCCG CTCCTGACCA TGCTTATCCC CGTGGTGGCG
GCGCTGATTG CGCTGGTAGC GGCCCTGGCC GGCTACACGA TGGTGAAGTT CTTCGGTGTG
ATCTTTCTCG GCCTTCCGCG CGAGCCCAGA CTCAACGACG CGCAGGACGC TGGCGGCTGG
GAGCGCGCCG GCATGCTATG GCTGGCACTG GGAAGCATCG CGCTTGGACT ATTGCCATCT
CCTTTCATCG GCCTGATCGA TGCAGTGACG CAGCAATTGG TCGGCAGCGG CCTCGGCGCA
CGTGTCGCGA CCAGCGGCTG GCTGCTTGCG CCGATCAGTC CGGAGCAGGC CAGCTACGGG
CCGGTCATCT TCCTGCTAGG TATCCTTGCC AGTTTCGCGC TTGCCTATCT TCTTGTGCGC
GGTCTCTACC ATGGCAGGCT GCGTCGCAGC GTGGCCTGGG CCTGCGGCTT TCCGTGGGGC
ACCCCGCGCA TGCAAGATAC CGCCGAGGGT TTCGGCCAGC CGATTCGGCA GATCTTCGAG
CCCTTTTTTC AGATTAGGCG TGACCTGCCC ACCCCGTTCG ACGAACACCC GCAATATCGG
GTGATAGTGT CAGATCCGTT CTGGCGCTGG CTGTACTTGC CCGTGGTCCG CCTGGTCGCG
GTTATGGCAC GCGCGGTCGG TGCAATTCAG CAGGGGCGCA TTTCAGCGTA TCTGCTGTTC
AGCTTTCTGA CGTTGATTGC CGTGCTGCTG GCGGTCATGC GGTGA
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| Protein sequence | MDGVPAVGQW LLLDWMLVVT AAWLMIGATG VLALHRLALV SRLLFPLGAL LGLVLSALAL
AAVGNSPEVA VLSIGLPRLP FHLRLDSLSA YFLMVIGAAA AGISVFAAGY FRQGEGTPPG
LLCLEYHLFL ASMAGVVLAD DAYAFMVMWE TMALSSFFLA TANHRIAEVR SAGYLYITMA
HIGAIAVLLC FGVLQANTGD YTFANMRAQT LTPFWASVAF LLAMFGFGAK AGLLPLHVWL
PEAHPAAPSP VSAMMSGVML NTAIYGLLRV VLDLAQIHLW WWGGLLLASG LATALYGVVF
AAVQTDMKRL LAYSSIENMG LLFVAIGLAL IFSAYGMKPL AALALTAALY HVASHAFFKS
LLFLGTGSVL HATAERSLGK LGGLIRQMPW VGWLTLVGVL TSAGLPPLGG FVSEWLLLQS
FLFTTGLPVP LLTMLIPVVA ALIALVAALA GYTMVKFFGV IFLGLPREPR LNDAQDAGGW
ERAGMLWLAL GSIALGLLPS PFIGLIDAVT QQLVGSGLGA RVATSGWLLA PISPEQASYG
PVIFLLGILA SFALAYLLVR GLYHGRLRRS VAWACGFPWG TPRMQDTAEG FGQPIRQIFE
PFFQIRRDLP TPFDEHPQYR VIVSDPFWRW LYLPVVRLVA VMARAVGAIQ QGRISAYLLF
SFLTLIAVLL AVMR
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