Gene Rmet_4662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4662 
Symbol 
ID4041523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1295326 
End bp1296486 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content58% 
IMG OID637980083 
Producthypothetical protein 
Protein accessionYP_586793 
Protein GI94313584 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein
[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.627824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCC CATACCTGCG CCGACTGACG GGGAAGGACC GCAGTCCCGA AGCGAACCTC 
CAATTGGCTC GGTATCTTGC GTTCGTTGCT GGAGCAACCA ACGCGGGTGG ATTCCTAGCC
GTGCAGCAGT ACACGTCACA CATGTCCGGT ATTCTGTCCG CTATGGCCGA TAACCTGGCA
CTGGGTAGCC TGGGACTTGT ACTCGATGGC CTTGGAGCCT TGATAGCGTT TCTGTCAGGT
GCCGCTTGCT CGGCTGTGCT CATCAACTGG GGACGAAGGG AGCAACTGCA AAGTACCTTT
GCCTTACCGC TGATGGTGGA GGCTGGGCTT CTGGTTTCCT TCGGGCTGCT CGGCGGCAAC
CTCGAACATC ACGAATGGCT ATTTGTTCCC GCGACAGTTC TGGTTTTGTG CTTCATCATG
GGCTTGCAAA ACGCCATGGT GACAAAGGTA TCGAATGCTG AGATCCGCAC TACGCATGTG
ACGGGTATGG TGACCGATAT TGGCATCGAA CTCGGCAAAC TCTTTTACTG GAATCTGTCC
AGGGCCGACT CTGGCAAGCC CGTGGTGCTA GCCAACAGGC AAAAGCTGCG TGTCTTGGCC
ACTCTGGTTG GTCTCTTCTT CGTCGGTGGC GTGGTCGGTG CACTGGGATT CAAGCATATC
GGGTTCAGTG CCACCCTACC GTTGGCAATC CTGCTGCTCG CCCTCGCGGC AGTCCCGGTG
GTCGACGATG TGCGCTTGCG CATGTGGCGC CAGGATTTTC TATCCCGCAT TGCTGCGCGG
GCACGTCGGT GGGCCCGCAC GGTCAAGACG GACATCCACG CGATCTGGCT GGCCGCACGG
GACCCCCGAA CTCCTTGGTA TGCAAAGGTT CTTGCCGCGG TTGTTGCGGG CTACGCGCTA
TCCCCGATCG ATCTCATTCC GGATTTCATC CCGGTGATTG GGTATCTGGA CGATGTTGTG
CTGGTTCCCT TGGGCATTCT GGTCGTAATC CGGCTGATCC CGGAAGAAGT CATGAAGGAG
CATCGGGCTG CGGCCAGCAG CGCCGAGCGC CGGCCCGCAA GCAAGATGGC GGCGGCAGCA
ATTATCGTGA TCTGGACACT TTCCGCTTTC GCAATCGCGC ATGCGCTCCC GCGCTTGCTG
GCAAGCTTTT TTCATCCATG A
 
Protein sequence
MLIPYLRRLT GKDRSPEANL QLARYLAFVA GATNAGGFLA VQQYTSHMSG ILSAMADNLA 
LGSLGLVLDG LGALIAFLSG AACSAVLINW GRREQLQSTF ALPLMVEAGL LVSFGLLGGN
LEHHEWLFVP ATVLVLCFIM GLQNAMVTKV SNAEIRTTHV TGMVTDIGIE LGKLFYWNLS
RADSGKPVVL ANRQKLRVLA TLVGLFFVGG VVGALGFKHI GFSATLPLAI LLLALAAVPV
VDDVRLRMWR QDFLSRIAAR ARRWARTVKT DIHAIWLAAR DPRTPWYAKV LAAVVAGYAL
SPIDLIPDFI PVIGYLDDVV LVPLGILVVI RLIPEEVMKE HRAAASSAER RPASKMAAAA
IIVIWTLSAF AIAHALPRLL ASFFHP