| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4651 |
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| Symbol | |
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| ID | 4041512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1281697 |
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| End bp | 1282839 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980072 |
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| Product | HlyD family multidrug resistance protein |
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| Protein accession | YP_586782 |
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| Protein GI | 94313573 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.731563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGCA CCACCACCGC GAGCCGCGCC CCCGCCGAGG CCGCTCCATC CACGGCAGCC
CCGGCCAGGC GTGGCACCAA CCGGCGGGCG TTGCTGATAC GCGGCGCGGG CGCCTTGCTC
GTCGTGACAG CCGCGGGATA CGGCTATCAC TGGTGGACTG ATTCACGCTT CACCGAAGAG
ACCGACGACG CCTACGTAGG CGGTGACGTG ACGCTGATTG CCGCGAAGGT GCCGGGCTAT
GTCGCGGAGG TTCTGGTGAC CGACAATCAG CAGGTGCACG CGGGAGATCT GCTGGCACGC
ATCGACGACC GCGACTATCG CGCAGCGCTG GCCAAGGCGG AGGGCGCAGT CGCGTCCGAG
CAGGCGCTGA TCGCCAATCT CGATGCACGG GAAAAACTGC AGCAGGCGGT GATCGCCGAG
GCCCGCGCCG GTGTGGCGGC GGTGGATGCG GAAACCAAGC GGGCGCGCGA CGACCAGGCG
CGCTATGCCA GTCTGGTCGA GAAATCGGCG GTCTCGATCC AAAGCTCTCA GAAGGCCGAT
GCCGACTACA AGCAATCGGT CGCCAACGGC CAGAAAGCGA AGGCCAGCGC GGAAGCCGCC
CTGCGCCAAC TCGATGTGAT CGCCACGCAA AGGCAGCAGG CGCAGGCATC GCTGACCCAG
GCGATTGCCG AGCGCGACAT CGCCCGACTC AATCTTGGCT ACACCGAACT TCGCGCGCCA
GTCGACGGCA CCGTGGGCAA CCGCCGCGCG CGCGTCGGCG TCTACGCGCC TAACGGCGGC
CAGTTGCTGT CGATCGTGCC GGCACGCGGA CTCTGGGTCG ATGCCAATTT CAAGGAGGGC
CAGCTTGCAC ATATGCGGCC CGGCATGCGT GCCACGATCG TGGCCGACGT GATGCCCGGC
AAGGTCTTCC ACGGCCGCGT CGAAAGCCTG GCACCGGCCA CGGGCGCGCA GTTCAGCGTG
CTGCCTCCGG AGAACGCCAC CGGCAACTTC ACGAAGATCG TGCAGCGCGT GCCGGTGCGG
ATCGTGCTGG ATGACGAAGA TGCCAGGCTC GGCACCCTGC GCCCGGGCCT GTCGGTGGTG
GCGGAAGTCG ATACGAAGGC CGCAAAGGTG GTGACGGCAG ACACCGCAGC GAGCAAGTCA
TGA
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| Protein sequence | MTSTTTASRA PAEAAPSTAA PARRGTNRRA LLIRGAGALL VVTAAGYGYH WWTDSRFTEE
TDDAYVGGDV TLIAAKVPGY VAEVLVTDNQ QVHAGDLLAR IDDRDYRAAL AKAEGAVASE
QALIANLDAR EKLQQAVIAE ARAGVAAVDA ETKRARDDQA RYASLVEKSA VSIQSSQKAD
ADYKQSVANG QKAKASAEAA LRQLDVIATQ RQQAQASLTQ AIAERDIARL NLGYTELRAP
VDGTVGNRRA RVGVYAPNGG QLLSIVPARG LWVDANFKEG QLAHMRPGMR ATIVADVMPG
KVFHGRVESL APATGAQFSV LPPENATGNF TKIVQRVPVR IVLDDEDARL GTLRPGLSVV
AEVDTKAAKV VTADTAASKS
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