Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4644 |
Symbol | |
ID | 4041505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1274591 |
End bp | 1275124 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637980065 |
Product | hypothetical protein |
Protein accession | YP_586775 |
Protein GI | 94313566 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.350838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGAC TTCCATACTT CGATCTGGAA CAGGCATCGC CGACGTACAA GAAGATGATC GGCGCGCGTC CGCCGCTGAA CCTTTACAGG ATGCTGCCCC ATGGCGGCGC CGTGGGGGAG GGATTCCTGG CGCTCGGTGG CGCGATCCTG CGCGAATCGG AACTGGACCC GACGTTGCGC GAACTGGTGA TCCTGCGTGT AGGGGCGCTA TCGGGGGCAT CCTATGAAAT CCATCAGCAT CGGCGCGTCG CCCGGAAGGC AGGGGTGCCT GAGAACAAGA TCGAAAGCGT GCTCGACCAC GGCGCCGCCG AGCCTGACCC GAACGTGTTC TCCGACCTCG AGATCCGGCT GATCCGCTTC ACAGATGCGG TCGTCCGGGA CGTCAAGGCG CCGGCCCCGC TATACGAGGC CGTCGCATCG GTGCTGTCCA ACAAGCAGCT GATCGAGGTG CTGATGACGA TCGGCTTCTA CATGCTGGTC AGCCGCTTCC TGGAAAATCT CGAGATCGAT ATCGAGAATC CACCTGTGGT CTGA
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Protein sequence | MARLPYFDLE QASPTYKKMI GARPPLNLYR MLPHGGAVGE GFLALGGAIL RESELDPTLR ELVILRVGAL SGASYEIHQH RRVARKAGVP ENKIESVLDH GAAEPDPNVF SDLEIRLIRF TDAVVRDVKA PAPLYEAVAS VLSNKQLIEV LMTIGFYMLV SRFLENLEID IENPPVV
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