| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4641 |
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| Symbol | |
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| ID | 4041502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1270792 |
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| End bp | 1272672 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637980062 |
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| Product | ATP-dependent endonuclease |
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| Protein accession | YP_586772 |
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| Protein GI | 94313563 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.01769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC AAACCGTTCG CATCCGAAAC TTTCGCACGT TGAAAGACGT AACGATTCCG
TTCGATTCCG TCACGACCTT CATCGGGCCG AACGGTGCTG GCAAATCAAC GGTGCTTCGT
GCGCTTGACT GGTTCTTCAA CGGCAAGCCC GGCTCGCTGA CCGAGGAGGA TTGCTCTTTT
GGGGCGACCG ACGAAGACAT CGAGGTTCAG ATCACCTTCG CAGACCTCAC CGAAAAGGAT
CGTGAGGCAC TTGGCAAGTA CGCGCCGGAG GGAGTTGGCA CGTTCACCGC ATGGAAGCGC
CGATCTCCTG ATGGCGCCGA TGTGCTCTCC GCCAATGCAA AGGGATTTCC GGACTTCAAT
GGCATCAAGG CGGCAGGGGG TGCGACTGCG AAGAGAGAGC TGTACGCCAG TCTCCGGCGC
GATCGCCCGG AGCTTGATCT TCCCGCGGCG AATACTGGTC CTGCCGTCGA GCAGTCGATG
ACGACTTGGG AGGCGGCTCA CACTGATCAA CTTCTCGATG CGCCCGAGGC TCTACAAACT
AACTTCTTCG GTTTCAACAG CGGCGGCAAG ATGAGTGGGC TCTTCGACTT CGTCCTCGTT
ACGGCCGACC TTCGGGCGAG TGAAGAGTCC ATCGACGGCA AGGCAAGCAT CATTGGGCGA
ATCCTTGAGC GCTCGATTGA CCGAACTGCC GCTGATGAGG CAATCGCAGA AATCGTTGCG
GAGTCACGGG CAAAGCAGCA ACAGGTCTAT GAAGAGAAGT TCAAGGAGCA GCTTGGGGCC
ATCACGACGC AGCTCAACGA GGTCGTCACA ACCTATGCGC CTGGCCGTGC AATCACGGTT
TCGCCGGCTG AAGTGGAACT CAAGGCGCCT CGCACGACGT TCGACGTGGC TGTGCTTGAT
GGCACCACCG AGACTGCGGT GGAGCGGCAA GGACACGGTT TTCAGCGCAC GCTGCTGATC
TCAGCACTAC AACTCTTGGC CCAGTCAGGT GCAGCCTCGG CCGAGGGAAT AATTTGCCTG
GCGATCGAGG AGCCAGAACT TTTCCAGCAT CCGATTCAGG CGCAGGCCTT TGCGAAGGTG
CTTAGATCGC TCGCCGAAGA CGCTAGCAAA CGCATTCAGG TGACCTATGC GACGCATAGT
CCCTACTTCC TGGAGGCCCG ACATTTCCAT CAAATCAGAC GGCTGACGAG ATCGGCTGAC
GAAGTCCCGG TAGTTACGGT CCACTGTGCC ACTGTTGAGA TTGTGAAGGC CAAGCTGAAT
GGAACAGTGG ATGGCGATGT GGTCGATCGC AGGCTCGACC ATAACGTGGC TGACCAGCTT
GCCATAGCAC TCTTCGCGAA TCGCGCTTTT CTTGTGGAGG GCACAACCGA ATCTGCTGTG
TTCTACGGTA TTGGAGATAG AACTTCCCCC GGCGCACTTG AAGCGGCAGG AATTTCGATC
GTTCCTGTGG GCAGCAAGAC ATCGATACCC CTCGCGCATG CGATTCTGGA ATCTATTGGC
GTGCCAGTCT ACGCACTGTT TGATGCGGAC GGTGGATTTG AAACGCGAGC CAAAGCCAAA
AACAAAAAGC AAGAGGAAAT AGATCGGGAG CGCAACAATC ATGCACTGGA GAACCGCAGG
TTAATGCGGT ACTTCGGCTT GCCTGAAGAG GATTTTCCAC CTACTACTAT TTCGGACGTC
GCGGCCATAT TGGATGATCA CCTTGAATCG TTTCTGTCTG CGAACTGGAG TGAATGGATA
ACTACCTGCA ATAGCGTCGA GCAGGATGCT GGAATAAATC TCTCGAAAAA CCAATTGGCA
TACCGGACTG CAACACTCCG GTCGGGAGGA GTGGTGCCAG TAATGCTTAC ACAGATTCTT
GTCAAGGTGG AGGGTAAGTA A
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| Protein sequence | MKIQTVRIRN FRTLKDVTIP FDSVTTFIGP NGAGKSTVLR ALDWFFNGKP GSLTEEDCSF
GATDEDIEVQ ITFADLTEKD REALGKYAPE GVGTFTAWKR RSPDGADVLS ANAKGFPDFN
GIKAAGGATA KRELYASLRR DRPELDLPAA NTGPAVEQSM TTWEAAHTDQ LLDAPEALQT
NFFGFNSGGK MSGLFDFVLV TADLRASEES IDGKASIIGR ILERSIDRTA ADEAIAEIVA
ESRAKQQQVY EEKFKEQLGA ITTQLNEVVT TYAPGRAITV SPAEVELKAP RTTFDVAVLD
GTTETAVERQ GHGFQRTLLI SALQLLAQSG AASAEGIICL AIEEPELFQH PIQAQAFAKV
LRSLAEDASK RIQVTYATHS PYFLEARHFH QIRRLTRSAD EVPVVTVHCA TVEIVKAKLN
GTVDGDVVDR RLDHNVADQL AIALFANRAF LVEGTTESAV FYGIGDRTSP GALEAAGISI
VPVGSKTSIP LAHAILESIG VPVYALFDAD GGFETRAKAK NKKQEEIDRE RNNHALENRR
LMRYFGLPEE DFPPTTISDV AAILDDHLES FLSANWSEWI TTCNSVEQDA GINLSKNQLA
YRTATLRSGG VVPVMLTQIL VKVEGK
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